CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Actinoplanes sp. N902-109
 

Actinoplanes sp. N902-109

Genome
 

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Total size (bp) 9228054
G + C content (%) 71.31
Coding sequences 8212
Coding density (%) 89.96
Average gene length (bp) 1011
Mean spacer hisKA - HATPase domains 36
Min spacer hisKA - HATPase domains 16
Max spacer hisKA - HATPase domains 75
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
71 69 3 1 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (119 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 106
Histidine Kinase, Hybrid 9
Histidine Kinase, Unorthodox 2
Histidine Kinase, CheA 2
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (100) - Phylogenetic Tree - Data Heatmap
OmpR Family NarL Family LytTR Family CheB Family RsbU Family AmiR_NasR Family PleD Family CheY Family TrxB Family IclR Family unclassified Family OmpR Family NarL Family LytTR Family CheB Family RsbU Family AmiR_NasR Family PleD Family CheY Family TrxB Family IclR Family unclassified Family
AlpA 0AmiR_NasR 1ArsR 0BetR 0CheB 2
CheC 0CheV 0CheY 17CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 1
LmbE 0LysR 0LytTR 1MerR 0NarL 38
NtrC 0OmpR 32PglZ 0PilB 0PleD 1
PleD_VieA 0PrrA 0RpfG 0RsbU 2Sarp 0
Spo0A 0TrxB 1VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 4
misPredicted TCS proteins (4)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 4
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(3)
HisKa 2
Hpt 1

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