CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Actinoplanes sp. SE50/110
 

Actinoplanes sp. SE50/110

Genome
 

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Total size (bp) 9239851
G + C content (%) 71.32
Coding sequences 8247
Coding density (%) 88.32
Average gene length (bp) 990

Histidine domain Logo
Mean spacer hisKA - HATPase domains 37
Min spacer hisKA - HATPase domains 16
Max spacer hisKA - HATPase domains 74
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
107 66 4 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (143 + 2) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 117
Histidine Kinase, Hybrid 19
Histidine Kinase, Unorthodox 4
Histidine Kinase, CheA 3
Possible incomplete Histidine Kinase 2
P2CS Predicted Response Regulators (102) - Phylogenetic Tree - Data Heatmap
OmpR Family NarL Family LytTR Family CheB Family RsbU Family AmiR_NasR Family PleD Family CheY Family TrxB Family unclassified Family OmpR Family NarL Family LytTR Family CheB Family RsbU Family AmiR_NasR Family PleD Family CheY Family TrxB Family unclassified Family
AlpA 0AmiR_NasR 1ArsR 0BetR 0CheB 3
CheC 0CheV 0CheY 21CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 1MerR 0NarL 38
NtrC 0OmpR 26PglZ 0PilB 0PleD 1
PleD_VieA 0PrrA 0RpfG 0RsbU 2Sarp 0
Spo0A 0TrxB 1VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 8
misPredicted TCS proteins (1)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 1
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(6)
HisKa 5
Hpt 1

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