CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Actinosynnema mirum DSM 43827
 

Actinosynnema mirum DSM 43827

Genome
 

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Total size (bp) 8248144
G + C content (%) 73.71
Coding sequences 6916
Coding density (%) 87.18
Average gene length (bp) 1040

Histidine domain Logo
Mean spacer hisKA - HATPase domains 38
Min spacer hisKA - HATPase domains 16
Max spacer hisKA - HATPase domains 55
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
52 57 1 0 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (87 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 81
Histidine Kinase, Hybrid 4
Histidine Kinase, Unorthodox 1
Histidine Kinase, CheA 1
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (81) - Phylogenetic Tree - Data Heatmap
OmpR Family NarL Family LytTR Family CheB Family RpfG Family RsbU Family AmiR_NasR Family CheY Family unclassified Family OmpR Family NarL Family LytTR Family CheB Family RpfG Family RsbU Family AmiR_NasR Family CheY Family unclassified Family
AlpA 0AmiR_NasR 1ArsR 0BetR 0CheB 1
CheC 0CheV 0CheY 7CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 2MerR 0NarL 39
NtrC 0OmpR 26PglZ 0PilB 0PleD 0
PleD_VieA 0PrrA 0RpfG 1RsbU 2Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 0unclassified 2
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(1)
HisKa 1
Hpt 0

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