CEA/DSV/IBeB/SBVMe/LEMIRE - P2CS Database Acetobacterium woodii DSM 1030
 

Acetobacterium woodii DSM 1030

Genome
 

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Total size (bp) 4044777
G + C content (%) 39.34
Coding sequences 3473
Coding density (%) 85.19
Average gene length (bp) 992

Histidine domain Logo
Mean spacer hisKA - HATPase domains 39
Min spacer hisKA - HATPase domains 18
Max spacer hisKA - HATPase domains 53
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Gene list (separated by carriage return)
Locus-tag
Gene name
GI
Domain description
Cross-talk
TCS Organization
Orphan Pair Triad Tetrad Pentad+
22 37 0 1 0
Partnership View
TCSs
export TCSs (Excel) - (Tab-delimited) - (Nucleotide Fasta) - (Aminoacid Fasta)
P2CS Predicted Histidine Kinases (46 + 0) - Phylogenetic Tree - Data Heatmap
Classic Hybrid Unorthodox CheA Classic Hybrid Unorthodox CheA
Histidine Kinase, Classic 35
Histidine Kinase, Hybrid 4
Histidine Kinase, Unorthodox 3
Histidine Kinase, CheA 4
Possible incomplete Histidine Kinase 0
P2CS Predicted Response Regulators (54) - Phylogenetic Tree - Data Heatmap
OmpR Family NarL Family LytTR Family YesN Family CheB Family RpfG Family AmiR_NasR Family PleD Family CheY Family CheC Family unclassified Family OmpR Family NarL Family LytTR Family YesN Family CheB Family RpfG Family AmiR_NasR Family PleD Family CheY Family CheC Family unclassified Family
AlpA 0AmiR_NasR 1ArsR 0BetR 0CheB 2
CheC 1CheV 0CheY 8CitT 0CsrA 0
CyC-C 0FrzZ 0HalX 0HxlR 0IclR 0
LmbE 0LysR 0LytTR 5MerR 0NarL 2
NtrC 0OmpR 25PglZ 0PilB 0PleD 1
PleD_VieA 0PrrA 0RpfG 6RsbU 0Sarp 0
Spo0A 0TrxB 0VieA 0VieB 0WcaA 0
Xre 0YcbB 0YesN 1unclassified 2
misPredicted TCS proteins (0)
misPredicted Histidine Kinase 0
misPredicted Response Regulator 0
misPredicted Phosphotransfer Protein 0
Phosphotransfer Proteins(0)
HisKa 0
Hpt 0

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