#Vibrio vulnificus YJ016 (54 genes)
Gene	Start	Stop	Strand	Original description	class	type	P2CS description	tm
VVA0008	7436	9376	+	signal transduction histidine kinase	HK	Hybrid	Histidine kinase, Hybrid contains 1 HAMP,1 HisKA,1 HATPase_c,1 Response_reg	1
VVA0018	16758	17861	+	signal transduction protein	HK	Classic	Histidine kinase, Classic contains 1 His_kinase,1 HATPase_c	4
VVA0019	17858	18628	+	response regulator	RR	LytTR	Response regulator, LytTR family contains 1 Response_reg,1 LytTR	0
VVA0112	128694	130214	-	signal transduction histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
VVA0113	130102	130758	-	DNA-binding response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
VVA0248	288237	289517	-	signal transduction histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	3
VVA0249	289527	290231	-	DNA-binding response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
VVA0325	363424	364011	+	fimbrial protein Z, transcriptional regulator	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 GerE	0
VVA0327	365499	366098	-	fimbrial protein Z, transcriptional regulator	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
VVA0328	366100	367299	-	two-component response regulator	RR	VieA	Response regulator, VieA family contains 1 Response_reg,1 EAL	0
VVA0329	367253	370984	-	sensor kinase VieS	HK	Unorthodox	Histidine kinase, Unorthodox contains 1 SBP_bac_3,1 PBPb,1 HisKA,1 HATPase_c,1 Response_reg,1 Hpt	3
VVA0429	495157	496080	-	chemotaxis signal transduction protein	RR	CheV	Response regulator, CheV family contains 1 CheW,1 Response_reg	0
VVA0575	646409	647392	+	chemotaxis signal transduction protein	RR	CheV	Response regulator, CheV family contains 1 CheW,1 Response_reg	0
VVA0584	654678	657896	+	hypothetical protein	HK	Unorthodox	Histidine kinase, Unorthodox contains 1 PAS,1 HisKA,1 HATPase_c,2 Response_reg,1 Hpt	0
VVA0585	657880	659016	+	response regulator	RR	RpfG	Response regulator, RpfG family contains 1 Response_reg,1 HD	0
VVA0612	686145	687704	+	sensor kinase CitA	HK	Classic	Histidine kinase, Classic contains 1 PAS, 1 HisKA_MA, 1 HATPase_c, 	2
VVA0613	687701	688381	+	transcriptional regulator CitB	RR	IclR	Response regulator, IclR family contains 1 Response_reg,1 HTH_IclR	0
VVA0633	703494	706448	+	signal transduction histidine kinase	HK	Unorthodox	Histidine kinase, Unorthodox contains 1 HAMP,1 HisKA,1 HATPase_c,1 Response_reg,1 Hpt	2
VVA0647	721913	725584	+	signal transduction histidine kinase	HK	Unorthodox	Histidine kinase, Unorthodox contains 1 SBP_bac_3,1 PBPb,1 HisKA,1 HATPase_c,1 Response_reg,1 Hpt	3
VVA0648	725588	727354	+	response regulator VieA	RR	NarL	Response regulator, NarL family contains 2 Response_reg,1 EAL,1 HTH_LUXR	0
VVA0649	727356	729023	+	response regulator	RR	unclassified	Response regulator, unclassified contains 1 Response_reg	0
VVA0716	810701	813064	+	signal transduction histidine kinase regulating                     phosphoglycerate transport system	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	1
VVA0717	813024	814322	+	phosphoglycerate transport system                     transcriptional regulatory protein PgtA	RR	PrrA	Response regulator, PrrA family contains 1 Response_reg,1 HTH_8	0
VVA0809	901849	902547	-	response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
VVA0810	902486	903913	-	signal transduction histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	2
VVA0817	910516	911475	-	regulatory components of sensory transduction                     system	RR	PleD	Response regulator, PleD family contains 1 Response_reg,1 GGDEF	0
VVA0933	1024819	1028964	+	signal transduction histidine kinase	HK	Hybrid	Histidine kinase, Hybrid contains 1 HAMP,1 GAF,1 HisKA,1 HATPase_c,3 Response_reg	4
VVA0936	1030383	1031408	+	hypothetical protein	RR	PleD	Response regulator, PleD family contains 1 Response_reg,1 GGDEF	0
VVA1015	1126358	1128355	+	signal transduction histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	1
VVA1016	1128445	1129986	-	rsponse regulator	RR	RpfG	Response regulator, RpfG family contains 1 Response_reg,1 HD	0
VVA1061	1188411	1189031	+	response repressor in two-component regulatory                     system with UhpB	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
VVA1062	1189031	1190530	+	sensory histidine kinase UhpB	HK	Classic	Histidine kinase, Classic contains 1 MASE1,1 HisKA_3,1 HATPase_c	11
VVA1185	1307300	1308304	-	chemotaxis protein CheC	RR	unclassified	Response regulator, unclassified contains 1 Response_reg	0
VVA1187	1308978	1309610	-	response regulator	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 GerE	0
VVA1188	1309607	1311322	-	nitrate/nitrite sensor protein NarQ	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA_3,1 HATPase_c	3
VVA1220	1341057	1343630	-	signal transduction histidine kinase	HK	Hybrid	Histidine kinase, Hybrid contains 1 HisKA,1 HATPase_c,1 Response_reg	1
VVA1229	1349533	1352178	-	hypothetical protein	HK	Hybrid	Histidine kinase, Hybrid contains 1 HisKA,1 HATPase_c,1 Response_reg	1
VVA1246	1365812	1367212	-	signal transduction histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
VVA1247	1367212	1367880	-	response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
VVA1320	1462948	1464402	+	signal transduction histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	2
VVA1322	1464399	1465049	+	response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
VVA1420	1574308	1576470	+	signal transduction histidine kinase	HK	Hybrid	Histidine kinase, Hybrid contains 1 HisKA,1 HATPase_c,1 Response_reg	3
VVA1472	1616619	1620605	-	sensory box sensor histidine kinase/response                     regulator	HK	Unorthodox	Histidine kinase, Unorthodox contains 1 PAS,1 HisKA,1 HATPase_c,2 Response_reg,1 Hpt	2
VVA1473	1620719	1621813	+	response regulator	RR	RpfG	Response regulator, RpfG family contains 1 Response_reg,1 HD	0
VVA1478	1628748	1631228	+	signal transduction histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 PAC,1 HisKA,1 HATPase_c	3
VVA1479	1627653	1629155	-	C4-dicarboxylate transport transcriptional                     regulatory protein	RR	NtrC	Response regulator, NtrC family contains 1 Response_reg,1 AAA,1 HTH_8	0
VVA1484	1634462	1635157	+	two component response regulator transcription                     regulator protein	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
VVA1485	1635108	1636499	+	signal transduction histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
VVA1649	1801047	1802858	+	signal transduction histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	2
VVA1650	1802855	1804084	+	two-component response regulator	RR	PrrA	Response regulator, PrrA family contains 1 Response_reg,1 HTH_8	0
VVA1682	1839203	1840879	-	serine phosphatase RsbU	RR	RsbU	Response regulator, RsbU family contains 1 Response_reg,1 SpoIIE	0
VVA1685	1842459	1843496	-	chemotaxis response regulator	RR	CheB	Response regulator, CheB family contains 1 Response_reg,1 CheB_methylest	0
VVA1691	1848401	1850515	-	chemotaxis protein histidine kinase	HK	CheA	Histidine kinase, CheA contains 1 Hpt,1 H-kinase_dim,1 HATPase_c,1 CheW	0
VVA1692	1850550	1850909	-	chemotaxis protein CheY	RR	CheY	Response regulator, CheY family contains 1 Response_reg	0
