#Vibrio cholerae O1 biovar El Tor str. N16961 (66 genes)
Gene	Start	Stop	Strand	Original description	class	type	P2CS description	tm
VC0303	311277	314720	+	sensor histidine kinase	HK	Hybrid	Histidine kinase, Hybrid contains 1 PAS_4,1 HisKA,1 HATPase_c,1 Response_reg	13
VC0622	658234	661767	-	sensory box sensor histidine kinase/response                     regulator	HK	Hybrid	Histidine kinase, Hybrid contains 1 HAMP,1 HisKA,1 HATPase_c,1 Response_reg	3
VC0693	740893	741606	-	two-component response-regulatory protein YehT	RR	LytTR	Response regulator, LytTR family contains 1 Response_reg,1 LytTR	0
VC0694	741616	743292	-	hypothetical protein	HK	Classic	Histidine kinase, Classic contains 1 GAF,1 His_kinase,1 HATPase_c	7
VC0719	772267	772956	+	DNA-binding response regulator PhoB	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
VC0720	772978	774279	+	phosphate regulon sensor protein	HK	Classic	Histidine kinase, Classic contains 1 PAS,1 HisKA,1 HATPase_c	1
VC0790	845591	846274	-	transcriptional regulator CitB	RR	CitT	Response regulator, CitT family contains 1 Response_reg,1 CitT	0
VC0791	846288	847985	-	sensor kinase citA	HK	Classic	Histidine kinase, Classic contains 1 PAS, 1 HisKA_MA, 1 HATPase_c, 	3
VC1021	1090250	1091617	+	LuxO repressor protein	RR	NtrC	Response regulator, NtrC family contains 1 Response_reg,1 AAA,1 HTH_8	0
VC1022	1091621	1091962	+	phosphorelay protein	PP	HPt	Phosphotransfer protein contains 1 Hpt	0
VC1050	1120189	1121295	+	response regulator	RR	unclassified	Response regulator, unclassified contains 1 Response_reg	0
VC1080	1147494	1147859	+	hypothetical protein	PP	HPt	Phosphotransfer protein contains 1 Hpt	0
VC1081	1147856	1148998	+	response regulator	RR	RpfG	Response regulator, RpfG family contains 1 Response_reg,1 HDOD	0
VC1082	1149033	1149398	+	response regulator	RR	CheY	Response regulator, CheY family contains 1 Response_reg	0
VC1084	1149990	1151309	+	sensory box sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 PAS_4, 1 HisKA_MA, 1 HATPase_c, 	0
VC1085	1151321	1152625	+	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	0
VC1086	1152625	1154235	+	response regulator	RR	VieA	Response regulator, VieA family contains 1 Response_reg,1 EAL	0
VC1087	1154252	1155595	+	response regulator	RR	RpfG	Response regulator, RpfG family contains 1 Response_reg,1 HD	0
VC1088	1155624	1157228	-	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP, 1 HisKA_MA, 1 HATPase_c, 	3
VC1155	1226418	1226963	-	response regulator	RR	CheY	Response regulator, CheY family contains 1 Response_reg	0
VC1156	1226912	1228207	-	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 cNMP_binding, 1 HisKA_MA, 1 HATPase_c, 	3
VC1213	1290575	1291219	+	response regulator	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 GerE	0
VC1276	1350777	1352132	+	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 Cache_2,1 HisKA_3,1 HATPase_c	2
VC1277	1352113	1352763	+	LuxR family transcriptional regulator	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
VC1315	1398499	1399848	+	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 cNMP_binding, 1 HisKA_MA, 1 HATPase_c, 	0
VC1316	1399817	1400293	+	chemotaxis protein CheY	RR	CheY	Response regulator, CheY family contains 1 Response_reg	0
VC1319	1402325	1403647	-	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	3
VC1320	1403673	1404377	-	DNA-binding response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
VC1348	1435354	1436679	-	response regulator	RR	RpfG	Response regulator, RpfG family contains 1 Response_reg,1 HD	0
VC1349	1436615	1440610	+	sensory box sensor histidine kinase/response                     regulator	HK	Unorthodox	Histidine kinase, Unorthodox contains 1 PAS_4,1 HisKA,1 HATPase_c,2 Response_reg,1 Hpt	3
VC1397	1487058	1489343	-	chemotaxis protein CheA	HK	CheA	Histidine kinase, CheA contains 1 Hpt,1 H-kinase_dim,1 HATPase_c,1 CheW	1
VC1398	1489340	1489714	-	chemotaxis protein CheY	RR	CheY	Response regulator, CheY family contains 1 Response_reg	0
VC1401	1491209	1492285	-	protein-glutamate methylesterase CheB	RR	CheB	Response regulator, CheB family contains 1 Response_reg,1 CheB_methylest	0
VC1445	1541452	1543170	+	sensor histidine kinase/response regulator	HK	Hybrid	Histidine kinase, Hybrid contains 1 HisKA,1 HATPase_c,1 Response_reg	0
VC1521	1634692	1636725	-	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
VC1522	1636715	1638169	-	Fis family transcriptional regulator	RR	NtrC	Response regulator, NtrC family contains 1 Response_reg,1 AAA_5,1 HTH_8	0
VC1602	1715544	1716530	-	chemotaxis protein CheV	RR	CheV	Response regulator, CheV family contains 1 CheW,1 Response_reg	0
VC1604	1717391	1718077	-	response regulator	RR	CitT	Response regulator, CitT family contains 1 Response_reg,1 CitT,1 HTH_11	0
VC1605	1718077	1719693	-	sensor kinase citA	HK	Classic	Histidine kinase, Classic contains 1 PAS, 1 HisKA_MA, 1 HATPase_c, 	3
VC1638	1764280	1764939	+	DNA-binding response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
VC1639	1764914	1766302	+	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA_MA, 1 HATPase_c	2
VC1651	1779308	1780969	-	response regulator VieB	RR	unclassified	Response regulator, unclassified contains 1 Response_reg	0
VC1652	1780981	1782735	-	response regulator VieA	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 EAL,1 HTH_LUXR	0
VC1653	1782740	1786180	-	sensory box sensor histidine kinase/response                     regulator VieS	HK	Unorthodox	Histidine kinase, Unorthodox contains 1 SBP_bac_3,1 PBPb,1 HisKA,1 HATPase_c,1 Response_reg,1 Hpt	2
VC1719	1857523	1858227	-	DNA-binding transcriptional regulator TorR	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
VC1831	1971491	1973701	-	sensor histidine kinase	HK	Hybrid	Histidine kinase, Hybrid contains 1 Cache_1,1 HAMP,1 HisKA,1 HATPase_c,1 Response_reg	3
VC1925	2075741	2077534	+	C4-dicarboxylate transport sensor protein	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	3
VC1926	2077537	2078877	+	C4-dicarboxylate transport transcriptional                     regulatory protein	RR	NtrC	Response regulator, NtrC family contains 1 Response_reg,1 AAA_5,1 HTH_8	0
VC2006	2158278	2159222	-	chemotaxis protein CheV	RR	CheV	Response regulator, CheV family contains 1 CheW,1 Response_reg	0
VC2038	2194664	2195878	-	hypothetical protein	PP	HPt	Phosphotransfer protein contains 1 Hpt	0
VC2062	2216465	2217598	-	chemotaxis-specific methylesterase	RR	CheB	Response regulator, CheB family contains 1 Response_reg,1 CheB_methylest	0
VC2063	2217625	2219982	-	chemotaxis protein CheA	HK	CheA	Histidine kinase, CheA contains 1 Hpt,1 H-kinase_dim,1 HATPase_c,1 CheW	0
VC2065	2220767	2221159	-	chemotaxis protein CheY	RR	CheY	Response regulator, CheY family contains 1 Response_reg	0
VC2135	2288709	2290148	-	Fis family transcriptional regulator	RR	NtrC	Response regulator, NtrC family contains 1 Response_reg,1 AAA_5,1 HTH_8	0
VC2136	2290145	2291200	-	sensory box sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	2
VC2202	2348060	2348986	-	chemotaxis protein CheV	RR	CheV	Response regulator, CheV family contains 1 CheW,1 Response_reg	0
VC2368	2524550	2525266	+	two-component response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
VC2369	2525325	2527682	-	aerobic respiration control sensor protein ArcB	HK	Unorthodox	Histidine kinase, Unorthodox contains 1 PAS_4,1 HisKA,1 HATPase_c,1 Response_reg,1 Hpt	2
VC2453	2634597	2637380	+	hybrid sensory histidine kinase BarA	HK	Unorthodox	Histidine kinase, Unorthodox contains 1 HAMP,1 HisKA,1 HATPase_c,1 Response_reg,1 Hpt	1
VC2692	2859805	2860491	+	transcriptional regulator CpxR	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
VC2693	2860491	2861885	+	two-component sensor protein	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
VC2702	2873971	2874600	+	LuxR family transcriptional regulator	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
VC2713	2887066	2888382	-	osmolarity sensor protein	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
VC2714	2888451	2889173	-	osmolarity response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
VC2748	2921393	2922457	+	nitrogen regulation protein NR(II)	HK	Classic	Histidine kinase, Classic contains 1 PAS,1 HisKA,1 HATPase_c	0
VC2749	2922461	2923867	+	nitrogen regulation protein NR(I)	RR	NtrC	Response regulator, NtrC family contains 1 Response_reg,1 AAA_5,1 HTH_8	0
