#Thioflavicoccus mobilis 8321 (62 genes)
Gene	Start	Stop	Strand	Original description	class	type	P2CS description	tm
Thimo_0093	95527	97863	+	signal transduction histidine kinase	HK	Hybrid	Histidine kinase, Hybrid contains 1 HisKA,1 HATPase_c,1 Response_reg	3
Thimo_0094	97936	98835	+	PAS domain-containing protein	RR	unclassified	Response regulator, unclassified contains 1 Response_reg,1 PAS	0
Thimo_0218	230070	230750	+	response regulator with CheY-like receiver                     domain and winged-helix DNA-binding domain	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
Thimo_0219	230740	232041	+	signal transduction histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
Thimo_0374	408032	409645	-	PAS domain-containing protein	HK	Classic	Histidine kinase, Classic contains 1 PAS,1 PAS_4,1 HisKA_3,1 HATPase_c	0
Thimo_0509	545968	546330	-	HPt domain-containing protein	PP	HPt	Phosphotransfer protein contains 1 Hpt	0
Thimo_0510	546568	547077	-	response regulator with CheY-like receiver                     domain and winged-helix DNA-binding domain	RR	CheY	Response regulator, CheY family contains 1 Response_reg	0
Thimo_0540	583190	585442	+	signal transduction histidine kinase	HK	Hybrid	Histidine kinase, Hybrid contains 1 HisKA,1 HATPase_c,2 Response_reg	5
Thimo_0623	667931	669157	-	EAL domain-containing protein	RR	VieA	Response regulator, VieA family contains 1 Response_reg,1 EAL	0
Thimo_0624	669147	673463	-	PAS domain-containing protein	HK	Unorthodox	Histidine kinase, Unorthodox contains 1 PAS,1 PAS_4,1 PAS_3,1 HisKA,1 HATPase_c,1 Response_reg,1 Hpt	3
Thimo_0665	717673	719766	-	signal transduction histidine kinase	HK	Hybrid	Histidine kinase, Hybrid contains 1 HisKA,1 HATPase_c,1 Response_reg	5
Thimo_0822	893764	895512	+	signal transduction histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	3
Thimo_0823	895515	896936	+	response regulator with CheY-like receiver,                     AAA-type ATPase, and DNA-binding domains	RR	NtrC	Response regulator, NtrC family contains 1 Response_reg,1 AAA_5,1 HTH_8	0
Thimo_0834	904709	907174	+	PAS domain-containing protein	HK	Hybrid	Histidine kinase, Hybrid contains 1 HAMP,1 PAS,1 HisKA,1 HATPase_c,1 Response_reg	1
Thimo_1242	1345226	1346593	-	response regulator with CheY-like receiver,                     AAA-type ATPase, and DNA-binding domains	RR	NtrC	Response regulator, NtrC family contains 1 Response_reg,1 AAA_5,1 HTH_8	0
Thimo_1243	1346877	1349075	-	nitrogen fixation and metabolism regulation                     signal transduction histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 PAS_4,1 HisKA,1 HATPase_c	4
Thimo_1273	1379368	1381005	+	nitrogen fixation negative regulator NifL	HK	Classic	Histidine kinase, Classic contains 2 PAS, 1 HisKA_MA, 1 HATPase_c, 	0
Thimo_1386	1507301	1507744	-	response regulator with CheY-like receiver,                     AAA-type ATPase, and DNA-binding domains	RR	CheY	Response regulator, CheY family contains 1 Response_reg	0
Thimo_1387	1507922	1509181	-	histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	0
Thimo_1399	1525271	1526731	-	response regulator with CheY-like receiver,                     AAA-type ATPase, and DNA-binding domains	RR	NtrC	Response regulator, NtrC family contains 1 Response_reg,1 AAA_5,1 HTH_8	0
Thimo_1402	1528508	1529185	+	histidine kinase	PP	HisKa	Phosphotransfer protein contains 1 HisKA	0
Thimo_1570	1727384	1732933	-	PAS domain-containing protein	HK	Hybrid	Histidine kinase, Hybrid contains 1 CheB_methylest,1 MeTrc,2 PAS_4,1 GAF,1 PAS_3,1 HisKA,1 HATPase_c,2 Response_reg	0
Thimo_1607	1786921	1787853	-	diguanylate cyclase	RR	PleD	Response regulator, PleD family contains 1 Response_reg,1 GGDEF	0
Thimo_1690	1866454	1867563	+	response regulator containing a CheY-like                     receiver domain and an HD-GYP domain	RR	RpfG	Response regulator, RpfG family contains 1 Response_reg,1 HD	0
Thimo_1691	1867673	1870192	+	signal transduction histidine kinase	HK	Unorthodox	Histidine kinase, Unorthodox contains 1 HisKA,1 HATPase_c,1 Response_reg,1 Hpt	5
Thimo_1723	1906184	1907554	-	signal transduction histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	2
Thimo_1724	1907551	1908216	-	response regulator with CheY-like receiver                     domain and winged-helix DNA-binding domain	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
Thimo_2062	2284026	2284718	+	response regulator with CheY-like receiver                     domain and winged-helix DNA-binding domain	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
Thimo_2063	2284715	2286187	+	signal transduction histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
Thimo_2115	2342176	2342874	-	response regulator with CheY-like receiver                     domain and winged-helix DNA-binding domain	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
Thimo_2145	2370428	2372533	-	histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	1
Thimo_2146	2372672	2373388	-	response regulator with CheY-like receiver                     domain and winged-helix DNA-binding domain	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
Thimo_2165	2398681	2399079	-	response regulator with CheY-like receiver,                     AAA-type ATPase, and DNA-binding domains	RR	CheY	Response regulator, CheY family contains 1 Response_reg	0
Thimo_2190	2432689	2434317	+	signal transduction histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	5
Thimo_2191	2434339	2435685	+	response regulator with CheY-like receiver,                     AAA-type ATPase, and DNA-binding domains	RR	NtrC	Response regulator, NtrC family contains 1 Response_reg,1 AAA_5,1 HTH_8	0
Thimo_2224	2466889	2468988	+	EAL domain-containing protein	RR	PleD_VieA	Response regulator, PleD_VieA family contains 1 Response_reg,1 PAS,1 GGDEF,1 EAL	0
Thimo_2323	2579066	2581648	+	PAS domain-containing protein	HK	Classic	Histidine kinase, Classic contains 1 PAS,1 HisKA,1 HATPase_c	2
Thimo_2324	2581645	2582262	+	response regulator	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 GerE	0
Thimo_2334	2592097	2593692	+	signal transduction histidine kinase,                     nitrate/nitrite-specific	HK	Classic	Histidine kinase, Classic contains 1 HisKA_3,1 HATPase_c	2
Thimo_2335	2593692	2594390	+	response regulator containing a CheY-like                     receiver domain and an HTH DNA-binding domain	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
Thimo_2360	2619472	2620959	-	signal transduction histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	1
Thimo_2361	2620949	2621683	-	response regulator with CheY-like receiver                     domain and winged-helix DNA-binding domain	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
Thimo_2465	2731105	2733339	+	PAS domain-containing protein	HK	Classic	Histidine kinase, Classic contains 1 PAS_4,1 GAF,1 PAS,1 HisKA,1 HATPase_c	0
Thimo_2466	2733332	2733949	+	response regulator	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
Thimo_2593	2869231	2869878	-	response regulator containing a CheY-like                     receiver domain and an HTH DNA-binding domain	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
Thimo_2595	2870586	2872115	+	PAS domain-containing protein	HK	Classic	Histidine kinase, Classic contains 1 PAS_4,1 PAS_3,1 HisKA_3,1 HATPase_c	0
Thimo_2618	2898510	2899154	-	response regulator containing a CheY-like                     receiver domain and an HTH DNA-binding domain	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
Thimo_3141	3439452	3440546	-	signal transduction histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
Thimo_3142	3440543	3441283	-	response regulator with CheY-like receiver                     domain and winged-helix DNA-binding domain	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
Thimo_3196	3510409	3511749	-	signal transduction histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	3
Thimo_3197	3511754	3512428	-	response regulator with CheY-like receiver                     domain and winged-helix DNA-binding domain	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
Thimo_3293	3607379	3607561	+	hypothetical protein	RR	CheY	Response regulator, CheY family contains 1 REC	0
Thimo_3295	3608292	3609266	+	histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	1
Thimo_3296	3609242	3610702	-	phosphate regulon sensor kinase PhoR	HK	Classic	Histidine kinase, Classic contains 1 PAS,1 HisKA,1 HATPase_c	2
Thimo_3297	3610839	3611522	-	phosphate regulon transcriptional regulatory                     protein PhoB	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
Thimo_3402	3719585	3723994	+	PAS domain-containing protein	HK	Unorthodox	Histidine kinase, Unorthodox contains 3 PAS,1 HisKA,1 HATPase_c,1 Response_reg,1 Hpt	3
Thimo_3426	3755646	3757148	+	histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	3
Thimo_3427	3757429	3758115	+	response regulator with CheY-like receiver                     domain and winged-helix DNA-binding domain	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
Thimo_3557	3898999	3900405	-	signal transduction histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
Thimo_3558	3900392	3901069	-	response regulator with CheY-like receiver                     domain and winged-helix DNA-binding domain	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
Thimo_3679	4020648	4022084	-	nitrogen regulation protein NR(I)	RR	NtrC	Response regulator, NtrC family contains 1 Response_reg,1 AAA_5,1 HTH_8	0
Thimo_3680	4022077	4023159	-	signal transduction histidine kinase, nitrogen                     specific	HK	Classic	Histidine kinase, Classic contains 1 PAS_4,1 HisKA,1 HATPase_c	0
