#Streptococcus pneumoniae gamPNI0373 (26 genes)
Gene	Start	Stop	Strand	Original description	class	type	P2CS description	tm
HMPREF1038_00146	119222	119920	+	DNA-binding response regulator SaeR	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
HMPREF1038_00147	119917	120969	+	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
HMPREF1038_00229	188860	190530	+	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 His_kinase,1 HATPase_c	1
HMPREF1038_00230	190542	191828	+	DNA-binding response regulator	RR	YesN	Response regulator, YesN family contains 1 Response_reg,1 HTH_AraC	0
HMPREF1038_00427	379010	379699	+	DNA-binding response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
HMPREF1038_00437	388721	389716	+	two-component signal (TCS03) sensor histidine                     kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA_3,1 HATPase_c	2
HMPREF1038_00438	389730	390362	+	two-component signal (TCS03) DNA-binding                     response regulator	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
HMPREF1038_00558	505286	506023	+	response regulator BlpR	RR	LytTR	Response regulator, LytTR family contains 1 Response_reg,1 LytTR	0
HMPREF1038_00559	506037	507377	+	histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA_MA, 1 HATPase_c	7
HMPREF1038_00625	565040	565696	+	DNA-binding response regulator VncR	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
HMPREF1038_00626	565693	567021	+	sensor histidine kinase VncS	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
HMPREF1038_00687	628367	629122	+	two-component signal (TCS09) DNA-binding                     response regulator	RR	YesN	Response regulator, YesN family contains 1 Response_reg,2 HTH_AraC	0
HMPREF1038_00688	629119	630810	+	two-component signal (TCS09) sensor histidine                     kinase	HK	Classic	Histidine kinase, Classic contains 1 Cache_1,1 HAMP,1 His_kinase,1 HATPase_c	1
HMPREF1038_00808	741455	742195	+	DNA-binding response regulator CiaR	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
HMPREF1038_00809	742185	743519	+	sensor histidine kinase CiaH	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	3
HMPREF1038_01229	1138067	1139416	-	sensory box histidine kinase VicK	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 PAS,1 HisKA,1 HATPase_c	1
HMPREF1038_01230	1139409	1140113	-	DNA-binding response regulator VicR	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
HMPREF1038_01616	1481648	1482622	-	two-component signal (TCS01) sensor histidine                     kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA_MA, 1 HATPase_c	3
HMPREF1038_01617	1482615	1483331	-	two-component signal (TCS01) DNA-binding                     response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
HMPREF1038_01986	1813743	1814342	-	two-component signal (TCS11) DNA-binding                     response regulator	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
HMPREF1038_01987	1814344	1815441	-	two-component signal (TCS11) sensor histidine                     kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA_3,1 HATPase_c	6
HMPREF1038_02091	1901324	1902031	+	alkaline phosphatase synthesis transcriptional                     regulatory protein PhoP	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
HMPREF1038_02092	1902032	1903363	+	sensor histidine kinase PnpS	HK	Classic	Histidine kinase, Classic contains 1 PAS_4,1 HisKA,1 HATPase_c	1
HMPREF1038_02200	2017026	2018357	-	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
HMPREF1038_02201	2018354	2019007	-	DNA-binding response regulator VncR	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
HMPREF1038_02244	2059726	2061051	-	sensor histidine kinase ComD	HK	Classic	Histidine kinase, Classic contains 1 HisKA_MA, 1 HATPase_c	6
