#Streptococcus parasanguinis FW213 (36 genes)
Gene	Start	Stop	Strand	Original description	class	type	P2CS description	tm
Spaf_0125	134978	135631	+	30S ribosomal protein S3	RR	unclassified	Response regulator, unclassified contains 1 Response_reg	0
Spaf_0233	238234	239250	+	Histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA_3,1 HATPase_c	2
Spaf_0234	239247	239879	+	Two-component response transcriptional                     regulator	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
Spaf_0264	277473	279119	+	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 His_kinase,1 HATPase_c	1
Spaf_0265	279112	280434	+	DNA-binding response regulator	RR	YesN	Response regulator, YesN family contains 1 Response_reg,1 HTH_AraC	0
Spaf_0306	319894	321219	+	Histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA_3,1 HATPase_c	5
Spaf_0307	321222	321908	+	Two-component system transcriptional regulator	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
Spaf_0317	329422	330165	+	putative response regulator of the competence                     regulon, ComE	RR	LytTR	Response regulator, LytTR family contains 1 Response_reg,1 LytTR	0
Spaf_0318	330179	331483	+	histidine protein kinase ComD	HK	Classic	Histidine kinase, Classic contains 1 HisKA_MA, 1 HATPase_c	5
Spaf_0507	522880	523977	+	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA_3,1 HATPase_c	6
Spaf_0508	523979	524578	+	DNA-binding response regulator	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
Spaf_0572	587883	588626	+	Two-component response transcriptional                     regulator	RR	YesN	Response regulator, YesN family contains 1 Response_reg,2 HTH_AraC	0
Spaf_0573	588623	590335	+	Two-component sensor kinase	HK	Classic	Histidine kinase, Classic contains 1 Cache_1,1 HAMP,1 His_kinase,1 HATPase_c	3
Spaf_0625	644702	645379	+	response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
Spaf_0626	645372	646346	+	D-tyrosyl-tRNA deacylase	HK	Classic	Histidine kinase, Classic contains 1 HisKA_MA, 1 HATPase_c	3
Spaf_0808	833390	834100	-	response regulator	RR	LytTR	Response regulator, LytTR family contains 1 Response_reg,1 LytTR	0
Spaf_0814	837365	838120	+	Response regulator, transcriptional regulatory                     protein	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
Spaf_0815	838104	839474	+	Sensor protein ciaH	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	2
Spaf_1096	1104988	1105659	+	NisR	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
Spaf_1097	1105644	1106720	+	NisK	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	3
Spaf_1113	1119781	1120479	+	SboR	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
Spaf_1114	1120476	1121846	+	SboK	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	3
Spaf_1119	1129665	1130753	-	NisK	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	2
Spaf_1120	1130723	1131409	-	NisR	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
Spaf_1326	1336682	1338004	-	sensor histidine kinase VncS	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
Spaf_1327	1338001	1338654	-	DNA-binding response regulator VncR	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
Spaf_1335	1346806	1348482	+	putative histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 His_kinase,1 HATPase_c	1
Spaf_1337	1348439	1350007	+	two-component response regulator	RR	YesN	Response regulator, YesN family contains 1 Response_reg,1 HTH_AraC	0
Spaf_1365	1375191	1377416	-	single-stranded-DNA-specific exonuclease RecJ	RR	unclassified	Response regulator, unclassified contains 1 Response_reg	0
Spaf_1479	1494016	1495368	-	histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 PAS,1 HisKA,1 HATPase_c	1
Spaf_1480	1495361	1496062	-	response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
Spaf_1617	1639905	1640603	-	two-component response transcriptional                     regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
Spaf_1770	1782273	1783160	-	putative histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	2
Spaf_1771	1783160	1783849	-	putative response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
Spaf_2105	2166309	2167067	-	two-component system LytR/AlgR family                     transcriptional regulator	RR	LytTR	Response regulator, LytTR family contains 1 Response_reg,1 LytTR	0
Spaf_2106	2167064	2168479	-	histidine protein kinase ComD	HK	Classic	Histidine kinase, Classic contains 1 HisKA_MA, 1 HATPase_c	8
