#Streptococcus pneumoniae P1031 (27 genes)
Gene	Start	Stop	Strand	Original description	class	type	P2CS description	tm
SPP_0145	117887	118585	+	response regulator SaeR	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
SPP_0146	118582	119634	+	histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
SPP_0224	187666	189264	+	sensor histidine kinase, putative	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 His_kinase,1 HATPase_c	0
SPP_0225	189276	190562	+	response regulator	RR	YesN	Response regulator, YesN family contains 1 Response_reg,1 HTH_AraC	0
SPP_0414	370468	371157	+	DNA-binding response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
SPP_0424	380179	381174	+	histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA_3,1 HATPase_c	2
SPP_0425	381188	381820	+	response regulator	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
SPP_0548	498007	498744	+	response regulator	RR	LytTR	Response regulator, LytTR family contains 1 Response_reg,1 LytTR	0
SPP_0549	498758	500098	+	histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA_MA, 1 HATPase_c	7
SPP_0617	557762	558418	+	VncR, response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
SPP_0618	558415	559743	+	VncS, histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
SPP_0681	620987	621724	+	response regulator	RR	YesN	Response regulator, YesN family contains 1 Response_reg,2 HTH_AraC	0
SPP_0682	621721	623412	+	histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 Cache_1,1 HAMP,1 His_kinase,1 HATPase_c	1
SPP_0807	734473	735147	+	transcriptional regulatory protein CiaR	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
SPP_0808	735137	736471	+	sensor protein CiaH	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	3
SPP_1263	1181060	1182409	-	sensor protein YycG	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 PAS,1 HisKA,1 HATPase_c	1
SPP_1264	1182402	1183106	-	alkaline phosphatase synthesis transcriptional                     regulatory proteinphoP	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
SPP_1651	1526315	1527289	-	histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA_MA, 1 HATPase_c	1
SPP_1652	1527282	1527959	-	response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
SPP_2024	1860470	1861069	-	response regulator	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
SPP_2025	1861071	1862168	-	histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA_3,1 HATPase_c	6
SPP_2136	1948071	1948778	+	alkaline phosphatase synthesis transcriptional                     regulatory proteinphoP	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
SPP_2137	1948779	1950110	+	histidine kinase PnpS	HK	Classic	Histidine kinase, Classic contains 1 PAS_4,1 HisKA,1 HATPase_c	1
SPP_2244	2063788	2065119	-	histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
SPP_2245	2065116	2065769	-	response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
SPP_2290	2106705	2107457	-	response regulator	RR	LytTR	Response regulator, LytTR family contains 1 Response_reg,1 LytTR	0
SPP_2291	2107454	2108779	-	ComD	HK	Classic	Histidine kinase, Classic contains 1 HisKA_MA, 1 HATPase_c	6
