#Streptococcus mutans UA159 (29 genes)
Gene	Start	Stop	Strand	Original description	class	type	P2CS description	tm
SMU_1008	963169	963840	+	response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
SMU_1009	963837	964790	+	histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA_MA, 1 HATPase_c	2
SMU_1037c	985855	986733	-	histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	2
SMU_1038c	986733	987425	-	response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
SMU_1128	1069642	1070949	-	histidine kinase sensor CiaH	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	2
SMU_1129	1070939	1071613	-	response regulator CiaR	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
SMU_1145c	1084846	1086159	-	histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	3
SMU_1146c	1086160	1086849	-	response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
SMU_1516	1444856	1446208	-	histidine kinase CovS	HK	Classic	Histidine kinase, Classic contains 1 PAS,1 HisKA,1 HATPase_c	1
SMU_1517	1446201	1446908	-	response regulator CovR	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
SMU_1547c	1474761	1475357	-	response regulator	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
SMU_1548c	1475354	1476364	-	histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA_3,1 HATPase_c	4
SMU_1814	1712304	1713683	-	histidine kinase, ScnK-like protein	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	3
SMU_1815	1713701	1714399	-	response regulator; ScnR-like protein	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
SMU_1916	1795290	1796615	-	histidine kinase of the competence regulon,                     ComD	HK	Classic	Histidine kinase, Classic contains 1 HisKA_MA, 1 HATPase_c	7
SMU_1917	1796612	1797364	-	response regulator of the competence regulon                     ComE	RR	LytTR	Response regulator, LytTR family contains 1 Response_reg,1 LytTR	0
SMU_1924	1803462	1804154	-	response regulator GcrR for glucan-binding                     protein C	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
SMU_1964c	1840282	1840962	-	response regulator	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
SMU_1965c	1840962	1842284	-	histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA_3,1 HATPase_c	7
SMU_45	47969	49570	+	hypothetical protein	HK	Classic	Histidine kinase, Classic contains 1 HisKA_MA, 1 HATPase_c	0
SMU_46	49572	50207	+	hypothetical protein	RR	unclassified	Response regulator, unclassified contains 1 Response_reg	0
SMU_486	455345	456349	+	histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA_3,1 HATPase_c	2
SMU_487	456336	456983	+	response regulator	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
SMU_576	538499	539233	-	response regulator LytR	RR	LytTR	Response regulator, LytTR family contains 1 Response_reg,1 LytTR	0
SMU_577	539214	540956	-	histidine kinase LytS	HK	Classic	Histidine kinase, Classic contains 1 GAF,1 His_kinase,1 HATPase_c	6
SMU_659	618390	619049	+	response regulator SpaR	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
SMU_660	619040	620422	+	histidine kinase SpaK	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	3
SMU_927	880715	881401	+	response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
SMU_928	881401	882639	+	histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	3
