#Shewanella baltica OS185 (103 genes)
Gene	Start	Stop	Strand	Original description	class	type	P2CS description	tm
Shew185_0051	62033	62722	-	two component transcriptional regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
Shew185_0052	62723	63769	-	integral membrane sensor signal transduction                     histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	3
Shew185_0054	65350	67023	+	signal transduction histidine kinase LytS	HK	Classic	Histidine kinase, Classic contains 1 His_kinase,1 HATPase_c	5
Shew185_0055	67017	67748	+	LytTR family two component transcriptional                     regulator	RR	LytTR	Response regulator, LytTR family contains 1 Response_reg,1 LytTR	0
Shew185_0238	277597	278913	-	integral membrane sensor signal transduction                     histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	2
Shew185_0239	278919	279578	-	two component transcriptional regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
Shew185_0253	292261	293637	-	integral membrane sensor signal transduction                     histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
Shew185_0254	293625	294311	-	two component transcriptional regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
Shew185_0258	296660	298072	-	nitrogen metabolism transcriptional regulator                     NtrC	RR	NtrC	Response regulator, NtrC family contains 1 Response_reg,1 AAA_5,1 HTH_8	0
Shew185_0259	298111	299157	-	signal transduction histidine kinase, nitrogen                     specific, NtrB	HK	Classic	Histidine kinase, Classic contains 1 PAS_4,1 HisKA,1 HATPase_c	0
Shew185_0286	325627	326304	+	two component transcriptional regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
Shew185_0287	326354	327610	+	integral membrane sensor signal transduction                     histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
Shew185_0304	345005	346048	+	histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	1
Shew185_0305	346077	346784	+	two component transcriptional regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
Shew185_0345	386615	387211	-	hypothetical protein	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
Shew185_0346	387211	388290	-	integral membrane sensor signal transduction                     histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA_3,1 HATPase_c	5
Shew185_0437	494630	495940	+	integral membrane sensor signal transduction                     histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA_MA, 1 HATPase_c	6
Shew185_0438	495937	496488	+	two component Fis family transcriptional                     regulator	RR	PrrA	Response regulator, PrrA family contains 1 Response_reg,1 HTH_8	0
Shew185_0451	511296	511898	-	response regulator receiver protein	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
Shew185_0452	512105	513916	+	hypothetical protein	HK	Classic	Histidine kinase, Classic contains 1 PBPb,1 HisKA,1 HATPase_c	2
Shew185_0604	722296	722979	+	two component transcriptional regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
Shew185_0605	722989	724425	+	hypothetical protein	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
Shew185_0792	926903	928534	-	hypothetical protein	HK	Classic	Histidine kinase, Classic contains 1 HAMP, 1 HisKA_MA, 1 HATPase_c, 	3
Shew185_0835	988128	993476	+	hypothetical protein	HK	Unorthodox	Histidine kinase, Unorthodox contains 1 HAMP,2 PAS,2 PAS_3,1 HisKA,1 HATPase_c,2 Response_reg,1 Hpt	1
Shew185_0836	993525	994541	+	response regulator receiver modulated metal                     dependent phosphohydrolase	RR	RpfG	Response regulator, RpfG family contains 1 Response_reg,1 HD	0
Shew185_0904	1072197	1073810	+	hypothetical protein	HK	Classic	Histidine kinase, Classic contains 1 PAS, 1 HisKA_MA, 1 HATPase_c, 	2
Shew185_0905	1073911	1074591	+	response regulator receiver	RR	CitT	Response regulator, CitT family contains 1 Response_reg,1 CitT,1 HTH_11	0
Shew185_0932	1109447	1111345	-	integral membrane sensor signal transduction                     histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA_MA, 1 HATPase_c	1
Shew185_1001	1194908	1196416	+	Fis family two component sigma54 specific                     transcriptional regulator	RR	NtrC	Response regulator, NtrC family contains 1 Response_reg,1 AAA_5,1 HTH_8	0
Shew185_1002	1196523	1198211	+	hypothetical protein	HK	Classic	Histidine kinase, Classic contains 1 HAMP, 1 HisKA_MA, 1 HATPase_c, 	2
Shew185_1070	1268919	1270187	-	hypothetical protein	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
Shew185_1071	1270199	1270912	-	two component transcriptional regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
Shew185_1224	1465661	1466026	+	Hpt protein	PP	HPt	Phosphotransfer protein contains 1 Hpt	0
Shew185_1285	1529566	1530216	-	two component LuxR family transcriptional                     regulator	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
Shew185_1286	1530245	1531423	-	integral membrane sensor signal transduction                     histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA_3,1 HATPase_c	4
Shew185_1364	1641228	1641917	+	two component transcriptional regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
Shew185_1365	1641998	1643296	+	PAS/PAC sensor signal transduction histidine                     kinase	HK	Classic	Histidine kinase, Classic contains 1 PAS,1 HisKA,1 HATPase_c	1
Shew185_1658	2005576	2006286	-	putative two-component response-regulatory                     protein YehT	RR	LytTR	Response regulator, LytTR family contains 1 Response_reg,1 LytTR	0
Shew185_1659	2006283	2007980	-	signal transduction histidine kinase LytS	HK	Classic	Histidine kinase, Classic contains 1 GAF,1 His_kinase,1 HATPase_c	7
Shew185_1749	2104748	2108188	+	hypothetical protein	HK	Hybrid	Histidine kinase, Hybrid contains 1 PAS,1 HisKA,1 HATPase_c,1 REC	14
Shew185_1768	2126361	2128997	-	multi-sensor signal transduction histidine                     kinase	HK	Classic	Histidine kinase, Classic contains 1 Cache_1, 1 HAMP, 1 PAS_4, 1 HisKA_MA, 1 HATPase_c, 	3
Shew185_1826	2189819	2191987	-	integral membrane sensor signal transduction                     histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	3
Shew185_1827	2192062	2192754	-	two component transcriptional regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
Shew185_1920	2287388	2288047	+	two component transcriptional regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
Shew185_1921	2288131	2289528	+	hypothetical protein	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	3
Shew185_2172	2588198	2589769	-	response regulator receiver modulated metal                     dependent phosphohydrolase	RR	RpfG	Response regulator, RpfG family contains 1 Response_reg,1 HD	0
Shew185_2230	2655181	2657100	-	integral membrane sensor hybrid histidine                     kinase	HK	Hybrid	Histidine kinase, Hybrid contains 1 HisKA,1 HATPase_c,1 Response_reg	3
Shew185_2232	2657391	2658599	-	response regulator receiver modulated                     diguanylate phosphodiesterase	RR	VieA	Response regulator, VieA family contains 1 Response_reg,1 EAL	0
Shew185_2241	2667802	2669442	+	response regulator receiver modulated                     diguanylate cyclase	RR	PleD	Response regulator, PleD family contains 1 Hpt,2 Response_reg,1 GGDEF	0
Shew185_2242	2669543	2670592	-	response regulator receiver modulated CheB                     methylesterase	RR	CheB	Response regulator, CheB family contains 1 Response_reg,1 CheB_methylest	0
Shew185_2247	2674572	2676758	-	CheA signal transduction histidine kinase	HK	CheA	Histidine kinase, CheA contains 1 Hpt,1 H-kinase_dim,1 HATPase_c,1 CheW	1
Shew185_2248	2676776	2677141	-	response regulator receiver protein	RR	CheY	Response regulator, CheY family contains 1 Response_reg	0
Shew185_2249	2677145	2678878	-	response regulator receiver protein	HK	Hybrid	Histidine kinase, Hybrid contains 1 Response_reg, 1 SpoIIE, 1 HisKA_MA, 1 HATPase_c, 	0
Shew185_2301	2743334	2744014	-	two component transcriptional regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
Shew185_2486	2967775	2968437	+	two component LuxR family transcriptional                     regulator	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
Shew185_2494	2981199	2981882	+	two component transcriptional regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
Shew185_2495	2981873	2983222	+	hypothetical protein	HK	Classic	Histidine kinase, Classic contains 1 HAMP, 1 HisKA_MA, 1 HATPase_c, 	3
Shew185_2600	3101546	3102190	-	response regulator	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 GerE	0
Shew185_2633	3142017	3142961	-	putative CheW protein	RR	CheV	Response regulator, CheV family contains 1 CheW,1 Response_reg	0
Shew185_2816	3372553	3373449	-	putative CheW protein	RR	CheV	Response regulator, CheV family contains 1 CheW,1 Response_reg	0
Shew185_2827	3389280	3391076	+	hypothetical protein	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	3
Shew185_2828	3391081	3392460	+	Fis family two component sigma54 specific                     transcriptional regulator	RR	NtrC	Response regulator, NtrC family contains 1 Response_reg,1 AAA_5,1 HTH_8	0
Shew185_2884	3461368	3462729	-	GAF sensor signal transduction histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 GAF, 1 HisKA_MA, 1 HATPase_c, 	0
Shew185_2885	3462726	3464267	-	response regulator receiver modulated metal                     dependent phosphohydrolase	RR	RpfG	Response regulator, RpfG family contains 1 Response_reg,1 HD	0
Shew185_2906	3488684	3489787	-	response regulator receiver protein	RR	unclassified	Response regulator, unclassified contains 1 Response_reg	0
Shew185_2915	3497419	3498546	-	chemotaxis-specific methylesterase	RR	CheB	Response regulator, CheB family contains 1 Response_reg,1 CheB_methylest	0
Shew185_2916	3498567	3500810	-	CheA signal transduction histidine kinase	HK	CheA	Histidine kinase, CheA contains 1 Hpt,1 H-kinase_dim,1 HATPase_c,1 CheW	4
Shew185_2918	3501577	3501960	-	response regulator receiver protein	RR	CheY	Response regulator, CheY family contains 1 Response_reg	0
Shew185_2938	3521326	3522669	-	Fis family two component sigma54 specific                     transcriptional regulator	RR	NtrC	Response regulator, NtrC family contains 1 Response_reg,1 AAA_5,1 HTH_8	0
Shew185_2939	3522662	3523744	-	PAS/PAC sensor signal transduction histidine                     kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	0
Shew185_2964	3548140	3549060	-	putative CheW protein	RR	CheV	Response regulator, CheV family contains 1 CheW,1 Response_reg	0
Shew185_3146	3754731	3757532	+	hybrid sensory histidine kinase BarA	HK	Unorthodox	Histidine kinase, Unorthodox contains 1 HAMP,1 HisKA,1 HATPase_c,1 Response_reg,1 Hpt	1
Shew185_3188	3803940	3804920	-	putative CheW protein	RR	CheV	Response regulator, CheV family contains 1 CheW,1 Response_reg	0
Shew185_3215	3836202	3839294	-	hypothetical protein	HK	Unorthodox	Histidine kinase, Unorthodox contains 1 HAMP,1 HisKA,1 HATPase_c,1 Response_reg,1 Hpt	2
Shew185_3217	3840428	3841138	-	DNA-binding transcriptional regulator TorR	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
Shew185_3243	3880305	3880745	+	response regulator receiver protein	RR	unclassified	Response regulator, unclassified contains 1 REC	0
Shew185_3244	3880746	3881906	+	response regulator receiver protein	RR	unclassified	Response regulator, unclassified contains 1 Response_reg	0
Shew185_3408	4047366	4048013	+	response regulator receiver protein	RR	unclassified	Response regulator, unclassified contains 1 Response_reg	0
Shew185_3568	4242384	4243682	-	hypothetical protein	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
Shew185_3569	4243679	4244383	-	two component transcriptional regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
Shew185_3712	4407892	4409724	+	hypothetical protein	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA_3,1 HATPase_c	1
Shew185_3713	4409717	4410346	+	two component LuxR family transcriptional                     regulator	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
Shew185_3719	4416108	4416824	+	two-component response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
Shew185_3732	4433378	4433998	-	response regulator receiver protein	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 GerE	0
Shew185_3733	4433998	4435935	-	hypothetical protein	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	2
Shew185_3749	4455660	4456334	+	two component transcriptional regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
Shew185_3750	4456331	4457659	+	integral membrane sensor signal transduction                     histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
Shew185_3788	4501715	4505431	-	multi-sensor hybrid histidine kinase	HK	Hybrid	Histidine kinase, Hybrid contains 1 Cache_1,1 PAS_4,1 PAS_3,1 HisKA,1 HATPase_c,2 Response_reg	1
Shew185_3793	4512898	4513893	+	response regulator receiver protein	RR	unclassified	Response regulator, unclassified contains 1 Response_reg	0
Shew185_3816	4533398	4534195	+	response regulator receiver protein	RR	FrzZ	Response regulator, FrzZ family contains 2 Response_reg	0
Shew185_3820	4536786	4538519	-	response regulator receiver modulated                     diguanylate cyclase/phosphodiesterase	RR	PleD_VieA	Response regulator, PleD_VieA family contains 1 Response_reg,1 GGDEF,1 EAL	0
Shew185_3821	4538529	4538963	-	response regulator receiver protein	RR	CheY	Response regulator, CheY family contains 1 Response_reg	0
Shew185_3822	4538960	4541113	-	multi-sensor signal transduction histidine                     kinase	HK	Classic	Histidine kinase, Classic contains 1 CHASE,1 PAS,1 HisKA,1 HATPase_c	3
Shew185_4195	4999291	5000538	-	histidine kinase A domain-containing protein	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	3
Shew185_4196	5000525	5001202	-	two component transcriptional regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
Shew185_4204	5009757	5010689	-	response regulator receiver modulated                     diguanylate cyclase	RR	PleD	Response regulator, PleD family contains 1 Response_reg,1 GGDEF	0
Shew185_4205	5010689	5015566	-	hypothetical protein	HK	Unorthodox	Histidine kinase, Unorthodox contains 1 CHASE,1 PAS_4,2 PAS,1 PAS_3,1 HisKA,1 HATPase_c,2 Response_reg,1 Hpt	1
Shew185_4206	5015925	5016650	+	osmolarity response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
Shew185_4207	5016693	5018009	+	osmolarity sensor protein	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
Shew185_4212	5022373	5023068	+	two component transcriptional regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
Shew185_4213	5023061	5024425	+	hypothetical protein	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	2
Shew185_4315	5147733	5149886	-	integral membrane sensor signal transduction                     histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	1
Shew185_4316	5149888	5151270	-	Fis family two component sigma54 specific                     transcriptional regulator	RR	NtrC	Response regulator, NtrC family contains 1 Response_reg,1 AAA_5,1 HTH_8	0
