>TM1040_3089_HK_Classic|Ruegeria sp. TM1040 plasmid mega plasmid
MNSSLASFFARTPAATLDSCDSEPIHLSGLIQNTGALIVQDPETGLIIGASENAHLFLGR
PVEAILGFSLTEIAPDIADELAEPDNGQNIVHEILESQRNVDDCVYDTICHVHDGRRVIE
FVLNEAPSASQARKRMRMSGPACAQIMAAPTFDAAMQIACNTVRTLTGFSRVKIYRFLPD
WSGETIAESNDGSLPSYLGMHFPSGDIPKQVRALMEIVPFRFVGRVDDDNIAIRALTSGA
GDIDLTWAMNRSVSAMHTAYLRNIGAGSSFSCSLMDKGKLWGLIACHSGGSMVVPADSWS
LVQEIGTALMLKFDQTERMATADMISRLRRIENEFAAEMRRTGDVEDVIKTLVPILQKFL
RADGFAFQFGTNMHTSGEVPPENFIRKLVQWSKTNMEDVDQFQTASLHADLPEAKHHIDT
ACGVLVQPIVMHRVCQLLWFRGPITRRVAWAGRPDAQAKIDPKTGVTLGPRQSFDKWVEE
HRDQSLPWEEAELEAAREIFKEFLDIITSQLLLKEENSSLRKFAHTAAHDIKGSLRGISA
ALGWMEEDDFEKTTTREHQELALAQARKLQNLTESLLEMTLLREQPTAKFSKTDLKKLAE
DTKLLIKYDLEQAGGQINVGALPDCTVASDLITRLLLNLCGNAIKYAKSDQPLQIDITGE
VLDGEMNRLIVTDNGPGIESKHAEKIFEQATRLHDGGEGCGFGLAICTEIAKSHHGQIYL
DTSYSDGARFVFEWPCEDPT
>TM1040_3156_RR_unclassified|Ruegeria sp. TM1040 plasmid mega plasmid
MTRVLIAGLGNMGLSHALAHHTQDGAEIVGLVNRSGQVDHPDLQGYPVFTDFHAALEDTK
PDLVVVATYSDSHADYAVAAMEAGAHVFVEKPLATTVKDARRVVATAKAKNRKLVVGYIL
RHHPSWVRLIEESRALGGPYVFRMNLNQQSKGAEWETHKALMQTTAPIVDCGVHYVDVWC
QITDAKPVQVNAMGLRLSDEIAPDMYNYGQFQVTFDDGSVGWYEAGWGPMMSETAFFVKD
VISPKGSVSITEADKSGSSDVDGHTRVGGLLVHRPEGDQLIDLPDEPGHQALCDAEQAYM
LRAIREDLDLSRHAQDAVQSLAICLAADESVRSGAPVKLNEVTP
>TM1040_3203_RR_CheY|Ruegeria sp. TM1040 plasmid mega plasmid
MSLKDSLRVMVVDDMSTSRGILTQCLDELGVKNYLVENNGQSAFQKLATNPVHLVLSDYN
MPGMDGLGLLQAVRGNAATQRVGFILVTGKPTPEVIEVGKKLGLNNIIRKPFTVASMRQA
IEQVVGRL
>TM1040_3206_HK_CheA|Ruegeria sp. TM1040 plasmid mega plasmid
MSGSIQDTFFEECEELLEAMDEGLTAIEGGDHDPEVVNAVFRAVHSIKGGAGAFGLDDLV
AFAHKFETVFDEVRSNKLQLDTKLIQLLLRCSDHLSDLVSVSRDGGSVDEEHNDVLIAGL
EEYLDEEEEELTFEPMGLGGPSVPLPLAMEEEKTYEIRFRPLKEMFGTGNEPFFLFQALS
ELGPLEVVLDDTELPGFDAMAMDDSYLAWNLTLTTTEPKSAVEAVFEFVEGLCELSITSD
KDEEEDAAALAALNAAFGVPGDSAEPETPAPFDVPAPAEATPMATSETTQKVETVKPESN
KSEQRGPKPTLRVDLERVDRLINAVGELIINHSMLAQQIANLDVADLRDVETELEGFKNL
ARDIQEGVMSIRAQPVKPLFQRMARIVREASSATEKSAKLITEGENTEVDKTVIERLSDP
LTHILRNAVDHGIEKPEDREAAGKNRTGEIRLSASHRSGSVCIEIKDNGAGINRPRVKQI
AIEKGLIPENADLTDAEIDNLLFLPGFSTAKEVSNLSGRGVGMDVVKNAVTALGGRINVS
STPGKGSTFTIILPLTLAVMDGMVVSVADQTMVVPITSIIETMRGSDDMINSLGADGTLL
SIRGNFVPICDVAGALGLRKPEGDKPPGVYLLVETETGQRSALAVDDIHDQRQVVIKSLD
GVCGNIPGVAAATILGDGKIAMILDSESIIAASPTSATFDSDRRMSNAIAS
>TM1040_3207_RR_CheY|Ruegeria sp. TM1040 plasmid mega plasmid
MKTKVLAIDDSRTIRNLLAATLEEAGFEYHCAVDGREGVDMYDDVAPDVVITDINMPNLD
GFGVIEELRGDGINSKVPILVLTTESAPEMKARARDAGATGWITKPFDDQSLIFALKRVT
GAVA
>TM1040_3231_HK_Hybrid|Ruegeria sp. TM1040 plasmid mega plasmid
MSWFRDLGVRVRLSAALAVMFGLMVLVSGIGLRVLDRTEVWMNVLHRDTLTEVEAAMDLS
RDVSELATSAPFLFALFAPYQLEQEVAAVMENLERVRQSSGNDPELDLPLARLGLAIEDL
AQALLPQSARQAELKAIDRALVRLNARSRRMSQDDLLPLEAQQDWGGLQQLTSVALGAAR
AEELIELGGFARDFQRLSGQLQSLSRQAPRETYDEIRNVVQRGGGLFVLKHGNLSARLDA
ENALFRIRQETRRVSAFAETKVAQAEDRLSRARAETSDTLAYARNAFLALSIASLIVAVT
SSVYVSRHVARNLERISGAMRRLASGNLRVDLPAPPTARDEIGQLFTAFGVFRDNARKLD
RRTAQMRHQNALFSRVFQNIKDGVAVEAADGRIIAENDNLRRLLRLPPDPDGTSDHMSAL
IAVSPFCRNAGGDERGGFDEYNDPDGNVIEIHLSPLPDGGQVWLISETTERKRMEARLEA
IRRVEALGKVSGEVAHDFGNILSSISGNLHLLEHAEPEQRRDLHERLGAALDLGASLTER
LLAFARKQHLAPQVTNVSELVSGMADLLEIAIPKHVSLQVEVSKAPATCLVDPGQLESAI
LNLCINAGQAISATGSDTGRIVVSVTAGERVEVAVSDDGCGMSEEVLRHATDPFFTRKPD
GGGTGLGLSMVDGFAHQSGGRLDIQTSTQGPMRGTIVTLSFPHQVYNSEENSSGGPWMAL
VIDDDPVSLERSCRLLQELGAQTLRCATYAEAVKALEGLDHLDAILTDLWLDDGFSGRDL
IRRAQECFPECRCALMSTRGAPTDLPRDVVFVEKPVSKETLREI
>TM1040_3232_RR_OmpR|Ruegeria sp. TM1040 plasmid mega plasmid
MQAVSPKPEAGPVIAIVDDDAQVRETLSALMHESGFESVCCPDIETFHALGDPPPVDLAL
IDLRLRGESGLTLAIHLRERHEIPIVMLTGVGDEIDKIIGLETGADDYLIKPFNPRELVA
RIRAVLRRYGHASARTVTSGKRQITFGEKRIDLDARRLLDSAGEEVPLTNAEYRLLEFLA
RNPERVVPREELLEALGADTQRYVDRTVDVLILRLRRKIEPVPAKPVHLQTRRARGYVFH
LGTE
>TM1040_3277_HK_Hybrid|Ruegeria sp. TM1040 plasmid mega plasmid
MNCLANLDVNLASGAAASLWVVCSIVLIRIARNIPFSGQLSFVLTLAAMLWWLFTVIFDL
ASQSEACKVAWSLAAWPGIVLVPVAWSFFVFDYTMNSCRTRRPFRLLIYIGLPSLVSAIA
VTNHWTHLLYGPDTRLVIEGGDSFVIFDHGPLFFAVAATLYVFLMIALGLLGFAFLKAKK
IFRPFMGALIIITAAPVVANLAYIGWGVTVFGFDPTPFTFAVSLIALSWLLVNNSMMDTA
AQGRTLMFYATQDPVILVDAGGQFVSANPAARQLIGDRIPDYGEPIEQLPEVGPLVKDLV
KAGGLGKPGPIRLAGRAFDPRAVPIDSPIQAQIPLLGWCISLVDITERERAAEALREALS
LAEAANRAKTQFLANVSHEIRTPLNGVLGMASVLGETKLDEEQQEFLQVIEDSGQVLLTT
IGDVLDLSKVEAGKMTLETKPFTLRNALEGARALFSARAKEKGIGLHLEMHDDLPRVILG
DDHRFRQVVHNLVSNAIKFTETGAVTISAAPAENGSILLVRVSDTGPGIPAEARDMIFQP
FQQVEGGDARKFGGTGLGLSISRQLCHLMGGSLQVADDEPQGATFEIRLPLLPANEAQEL
LSQPASGAVSVPHGPALDVLVVDDNRTNRLILEKFLSSTPYRVKSVSNGQEAIGLVHSFS
FDVILMDIQMPRMDGVETTQKIRSIEQAKGREPSFIVAVTGNAMPEQLSHYLSVGMDDVL
AKPVSKTLLLSLIREIRREVA
>TM1040_3299_HK_Classic|Ruegeria sp. TM1040 plasmid mega plasmid
MSPKRLPIKLKVALVIFIVSGAAFSAFFFLNYRDTVSRIHTHTEQLLERDHKTHARYIQD
TLTTMRQDAETLIGFPPISGILRTRQSDELTDPLDGSSLQDWLVRLETLFKSVLTNRSGY
SQIRLLLPENNWSEIVRVNFVAGEVSHVDPTDLQQKGDEPYIRLLQAVETDDSLFSNVTR
NREKGSVVGPPTLRSIKRLVNDDGAVIGAVVINAVLSELLSVPEYEGELGRTYYVIQNHV
EPAFPLATDDQSFVLSPEETPRVLDFKVVAQQSVGQLIDLGSDENLYLSSVPISDAHVPF
DFFIATDIDAGALFQQARHELWRNFAHALVLTLLASGLGYVFAARLLSPLEHLIDEIKKS
AGLRGDQAGSLSKGGDEVTLIANNFKQLTSDLVRETQRLDMVLTNVAEGIVTLLPDGTIE
DANPASCRILDEDSVHLTGRNLFEMLGFDEEHGKEILCETISARGDQPPQQREISLKKQA
GEPIVINLVMRHTSYAEGSRFVALIRDVTERAAATARSEALIAALRRSNAELDQFAYIAS
HDLKAPLRVIENAVSWLEEDLRPHLTDDTRESMDLLRNRARRMEALLSDLLKHSRIGRVA
DSVEKVTGVQLSESILELLDVPENIRIVFSDDFYHLTVQKMPLETVLVNLIGNSIKHHDR
GSGYVSIDVKHSDGFMRFRVEDDGPGIEPAYHDRIFDIFRTLRSRDQLESSGMGLAIVKK
HIEVVGGKIDVLSDGERGTVFEFSWPDEIVQEEDKAA
>TM1040_3300_HK_Hybrid|Ruegeria sp. TM1040 plasmid mega plasmid
MDEKKMLIVDDDAGDRKMMRRHLSKLYPTNSILEAESGETARSFVDEEVEVIFLDYQLPD
ISGIDLMSSFFRRWPHCVIFIMTGQGDEEIAKSAILSGAADYISKSAITPGALQRMIANG
LQVARMKWRIEEHQKELQQFSDVLVHDLRAPIRAIKFLSDQILEDFAAGDMDEVTREFDL
MKKSVSKMSDLIERLASHINPHSEGAPEMIAAESLVESACLAISQDIANSDAIISTEHND
ISVSCFPPDISQLLQNLISNSIKYRSKEQPQIDISVKQLSSGVQFAIQDNGIGVPEEYRK
RIFEPFKRLQRSSDLPGSGLGLATCAKIAKRHDGEIWCDPNVSSGTLIRFSLKLPPPMTL
PDQEDDEEETVVPAAFRDTQARARH
>TM1040_3335_RR_OmpR|Ruegeria sp. TM1040 plasmid mega plasmid
MSARILVVDDDPDILEVTRFAIEKAGFETCFASDGLAAIAAQRRDAPDLVVLDIGLPEKD
GLEVCRDIRKSSDVPILFLTARDEEIDRIVGLELGADDYLTKPFSPRELVARIKAILKRS
TPSITQLPTALTHGALELDAERHQCAFAGVPVSLTGSEFRLLKVLMTRPDLVLTRAQLVE
ALYGFNIHVSDRTIDSHIRNIRAKMSEVGCTEAVVTVHGVGLRMGACQQT
>TM1040_3336_HK_Classic|Ruegeria sp. TM1040 plasmid mega plasmid
MIRKWRPRLWTVVLLVLAIVLCLPIAGLILFRFYDNQLVQQTEESVLAQAAVMAATYADL
YSEAAGLAPPKPKPVSAQDAIFPSLSINSATVLPPRPDAANPSTSVTATYQRLAPQLSRI
ASSAQAQTLAGYRFLDTQGNVIAGTAEIGRDLGHVSEVRAALDGHVVSVARTRVRDSSPP
ALYTLSRGARVRVFVAMPVHVNEALIGAVYVSRTPSHIFRFLYGERFNLLKAAAFVALST
TLIGYVFWRFITRPIRLLKERSQLATQGNHAFEAPDHLGTREIEDLSLSFKSLTERLQNN
RDALKTYTAHVTHELKSPLTALKGAAELLRDDDLSQSQRHRLLDTIEKGGTRIEDLLAHM
RAFSLADQQAMSGRCSLEQIQDQITQAFPALSIMIENGSLGLPSEATTLSILLTHLLQNA
QQHGAKTVKLRTAHTNGSITLRISDDGAGISAGNADKILQPFFTTRRDSGGTGMGLNIVK
STVEALGGHLYILPQDTGAGFELEWPNATPSLDRTQAPGA
>TM1040_3371_HK_Classic|Ruegeria sp. TM1040 plasmid mega plasmid
MHAHRTSKETPDVSVTRERPGPVLCNALDILDEGFVLFDRDRKLVFANKSYAAMLGPHAH
LLEPGRAMQEIISQAVASGHIRILRGAEQGMPAFLAALGTLDSATIEISVKDGTQREINL
TCLEDGHLVAKVKDVTEQRTAEARARTLLNKAIDAVDFGIALTDENDRLVFANQKYREVA
DPDGALLEPGRHIVEAYSQAIETGVFQLPEGSTAAEILSELQDLIGSAAKGFSLTSSTGR
EIVGNIYETDLGGKLLTLEDVTDQLRAERLYTDAVGRLPVGVAIEEASGTLSHCNNAFAE
PFGHSAEDLMKLSDTERFLSLAPMIQSIAGQDVGTRGVEIFSAAIKKQRDTLQPMEVCFR
NGRHFLVERAITEGDGRVVVVTETTALKEAERRSLETLTDTIQSLEEGLVVFDSDAGFLL
GNRRWRDLFFGDTSEPAPGERVSMLWQRLVCAGAICTPAGTTPEAYAQQLDQFTQSLGQN
ETLFLRDGKTLLVSAHRTEQQGFLLTFVDVTEQRRAEAEQREADLLLRKIVDACPANFLV
SRVDDGKIIYCPPPSRERFGNITSTLSFFLNAEDRQTYLDALLPTGALDDYRVQFRRADG
SIMQGITAARVTEYKGEQVIVSSTRDISDLLAMQEELQQQRDAAHQAEKLSALGELLAGV
AHELNNPLSIIVGYAQMLEGRLQDKVLSKRVDRIAEAADRSARIVRAFLAMARQRPTKIE
PCSLNDIVLAALDVAGYGMRSSGTEILSELDDDLPLVSGDADQLVQVFSNLIINAEQALA
PLGQAGRLTIRSSFDPAQNQSVVEIRDNGPGIPAAIRARIFEPFFTTKDVGKGTGIGLAF
SHRIVDAHGGQLDLETTEGEGTRFFVRLGVHDTGRPLKNDPEDDTTP
>TM1040_3372_RR_CheY|Ruegeria sp. TM1040 plasmid mega plasmid
MLEDLRCVPTLATDARAALGVLEQDGFDMIVSDFKMPGMNGAEFYDALLNRHPQYADRVG
FVTGDALSEDIFRFLSKVGRPHIEKPILRDDLSALLERLTCKGVNG
>TM1040_3373_RR_OmpR|Ruegeria sp. TM1040 plasmid mega plasmid
MTHAAEAKRILVCDDEHHLREMLSEYLCERGYEVMEAENADAMLAVFNDDTPDVVVLDIN
MPGTDGLTALRTLRVNSTIPVIMLSAAGEVVDRIVGLEMGADDYLAKPVDLRELEARIKA
ALRRQGFAGEESAQRDRMTGTVPFGMCRLDLDGAKLFGESGEEIAITSMEFSLLRVFAQN
RGRVLNRDQLLEQAHDRGWEHFDRSIDLRISRLRRKIEQNPTKPETIRTVRGIGYIFD
>TM1040_3431_HK_Hybrid|Ruegeria sp. TM1040 plasmid mega plasmid
MEQTQPDTDGPLSQHNARFSPRGLLIRYAVIRARMYYARMFAAAGLTSVLAVIFGPFWPL
VFFVLYLITDKAETTYLRGLPERLENGTSLAKAKRIIFVFSVLYAGSVCGFAAIPYVQMH
TEAGAHEILAEPFFALCIVLGPALSAALDLRYVPLAASVRLLMLSLLPFGLTAHILLQNQ
THGADLQLMVAGLVAFFFTQIWFVVMVQKRHRNSRRNLRSQALQRQALEDAYMRLFDQKQ
EARRLAMIAEHANDGVMLIGRDGIVRWANDGFSRLTGYTFDELVGQNPGKILNSENTDPA
ALRVIEAGREKGEPFRAELINRRKDGKEIWIETNQVPVFDDTGQIETYIAVERDVTATKE
YERQLKEARLAAEEGARIKEEFLATMSHEFRTPMNGVIGMAQMLQATDLSEDQRLYTDTI
LGSSRALLALINDVLDLSHMNAAGVSLFNVDFDLHACVGDIVRLLSGQADEKHLELSVEI
DPDVPVWVTGDDRRLRQILVNLLGNAVKFTTSGSIFIRLRGVVTGDQVALKIEVEDTGIG
IPADKLEKIFERFSQADNAISRKYGGSGLGLSISRGLAQAMGGDIDVTSVEGEGACFTLM
LDMGVADCPSIVADEAEDADSLPALDQLQGLRLLVAEDNRVNRLLIRKFLDDAPLELRFA
TNGAEAQELAKRFRPQVILMDMSMPEVNGLEATRAIRSFDITQPYIAALTANVDETSRQA
CVDAGMDTFLSKPLSRKELLNLLLTFSERARASERG
>TM1040_3480_RR_CheY|Ruegeria sp. TM1040 plasmid mega plasmid
LQELKRLQKDNDRLWREVSELALDTLILSESAIEELERCDRLPELILLDINMPRMNGFEF
LEIVDEKLSQAQPPVKVALLTTSSNPADARKAESFASVGWFLSKPLGRDMLDQLVSEFS
>TM1040_3612_HK_Hybrid|Ruegeria sp. TM1040 plasmid mega plasmid
LKAPLRKLLQSKGILSQIVVSMSLAALLVVVAVGGVARRYEVERVSEQLSEQANLTVSLL
SGLMLEAIIVEDVPVLETGLVEAITRYPKILSINIENSEGEVIAEASNSAADEAEGYVMY
RRPVEFEGFVFGTMVVQWSTAEGREIVLDKVRQTITWTVLAVIAMSLLMLYLVYRLALNP
LQIVHARMSNAVAGAKTGHFSLPWYSSREFQALNVSVGVLEDSFAERDEREKALEHAREQ
AEIASRAKSEFLANMSHEIRTPMNGVIGMAEVLRETELTPDQELYTETIVKSGNALLSII
NDILSFSKIEAGKLELTQATFNLRTVIEDVIMLLAPKAAEKWVQLTLRYDPDLAEFYDGD
AGRIRQIVTNVVGNAVKFTSRGSVHIDVTGVARGQLMDLRISVVDTGIGIPAEKLDRIFH
AFEQVDGAATRNFEGTGLGLAISTRLLQMMKGRIHVTSSEGKGSVFTIDISLPTSDRAPV
AFLPEQPVSGLHALIVDDLELNRRILGERLRSWGLRVTEAASAMEAMLHLDEMRDATDTC
DLIFLDYNMPDCDGYELALRIRGLPNTASVPIIVISSVDPALSQSMLADIEVCHQVLKPV
RADDLRGVISQALGAGSAVEERAPSGSEDAKIMQRIKVLMAEDNRTNQVVVTRMLKSESV
DIIIASNGQEAIEMYLRERPDVILMDMMMPVMDGLDATKAIRKIENETGVRQVPIIALTA
NALQSHEEACLEVGMDDFLSKPIRKQALLDALHQWTEDRDSAEPQNKLEA
