#Rhodococcus erythropolis PR4 (83 genes)
Gene	Start	Stop	Strand	Original description	class	type	P2CS description	tm
RER_00980	117302	117919	-	NarL family two-component response regulator	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
RER_00990	117916	119118	-	two-component histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA_3,1 HATPase_c	5
RER_03570	396366	397037	-	OmpR family two-component response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
RER_04280	477834	478901	-	two-component histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA_MA, 1 HATPase_c	5
RER_04300	479465	480169	-	NarL family two-component response regulator	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 GerE	0
RER_04490	500442	501821	-	two-component histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
RER_04500	501818	502513	-	OmpR family two-component response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
RER_06550	733784	734974	+	two-component histidine kinase	PP	HisKa	Phosphotransfer protein contains 1 HisKA_3	0
RER_06560	735023	735676	+	NarL family two-component response regulator	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
RER_09870	1099815	1100546	+	two-component response regulator PhoP	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
RER_09880	1100543	1101994	+	two-component histidine kinase PhoR	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
RER_10180	1134147	1134821	+	OmpR family two-component response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
RER_10190	1134825	1136279	-	two-component histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	3
RER_10290	1149226	1150503	+	two-component histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA_3,1 HATPase_c	5
RER_10300	1150500	1151162	+	NarL family two-component response regulator	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
RER_10350	1156649	1157338	-	CriR family two-component response regulator	RR	unclassified	Response regulator, unclassified contains 1 Response_reg,1 HTH_11	0
RER_10360	1157335	1158921	-	two-component histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 PAS, 1 HisKA_MA, 1 HATPase_c, 	2
RER_10530	1174989	1176095	-	two-component histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
RER_10540	1176092	1176805	-	OmpR family two-component response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
RER_10770	1200827	1202050	+	two-component histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA_3,1 HATPase_c	4
RER_10780	1202043	1202711	+	NarL family two-component response regulator	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
RER_11340	1265496	1266752	+	two-component histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA_3,1 HATPase_c	4
RER_11350	1266740	1267381	+	NarL family two-component response regulator	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 GerE	0
RER_12300	1359695	1361395	-	two-component histidine kinase	HK	Classic	Histidine kinase, Classic contains 2 GAF,1 HisKA_3,1 HATPase_c	0
RER_12310	1361385	1362116	-	NarL family two-component response regulator	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
RER_13610	1498918	1499577	+	NarL family two-component response regulator	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
RER_13830	1516600	1517283	-	CriR family two-component response regulator	RR	IclR	Response regulator, IclR family contains 1 Response_reg,1 HTH_IclR	0
RER_13840	1517280	1518932	-	two-component histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 PAS, 1 HisKA_MA, 1 HATPase_c, 	2
RER_16210	1761492	1762727	+	two-component histidine kinase SenX3	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	1
RER_16220	1762724	1763413	+	two-component response regulator RegX3	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
RER_17840	1918496	1919956	+	two-component histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 GAF,1 HisKA_3,1 HATPase_c	2
RER_17850	1920004	1920636	+	NarL family two-component response regulator	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
RER_19410	2126105	2127454	+	two-component histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 PspC, 1 HisKA_MA, 1 HATPase_c, 	4
RER_19420	2127451	2128110	+	NarL family two-component response regulator	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
RER_19450	2131009	2132403	-	two-component histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
RER_19460	2132400	2133098	-	OmpR family two-component response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
RER_21350	2329442	2330122	+	OmpR family two-component response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
RER_21360	2330149	2331471	+	two-component histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
RER_21410	2334423	2335610	+	two-component histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA_3,1 HATPase_c	4
RER_21420	2335658	2336338	+	NarL family two-component response regulator	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
RER_21680	2361786	2362463	+	two-component response regulator MtrA	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
RER_21690	2362460	2364199	+	two-component histidine kinase MtrB	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	3
RER_21890	2383636	2385138	+	two-component histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 PAS_4,1 HisKA_2,1 HATPase_c	0
RER_23020	2490937	2492082	+	two-component histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA_3,1 HATPase_c	6
RER_23030	2492079	2492717	+	NarL family two-component response regulator	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
RER_23870	2577976	2579250	+	two-component histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA_3,1 HATPase_c	6
RER_23880	2579260	2579922	+	NarL family two-component response regulator	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
RER_27280	2933027	2933449	-	two-component response regulator	RR	unclassified	Response regulator, unclassified contains 1 REC	0
RER_29160	3127786	3128421	-	NarL family two-component response regulator	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
RER_29170	3128418	3129653	-	two-component histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA_3,1 HATPase_c	6
RER_31330	3398232	3398891	-	NarL family two-component response regulator	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
RER_31340	3398949	3400112	-	two-component histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA_3,1 HATPase_c	5
RER_31570	3421331	3422302	-	hypothetical protein	HK	Classic	Probable incomplete histidine kinase contains 1 HAMP,1 HisKA	2
RER_33280	3614627	3615253	-	two-component response regulator	RR	AmiR_NasR	Response regulator, AmiR_NasR family contains 1 Response_reg,1 ANTAR	0
RER_34200	3744295	3745986	-	two-component histidine kinase DevS	HK	Classic	Histidine kinase, Classic contains 2 GAF,1 HisKA_3,1 HATPase_c	0
RER_34210	3745983	3746630	-	two-component response regulator DevR	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
RER_36800	4023751	4024425	-	NarL family two-component response regulator	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
RER_36810	4024422	4025624	-	two-component histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA_3,1 HATPase_c	5
RER_37220	4064589	4065269	-	turgor pressure transcriptional regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
RER_37230	4065266	4067806	-	turgor pressure sensor kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	4
RER_40230	4404703	4406379	+	two-component system thioredoxin reductase	RR	TrxB	Response regulator, TrxB family contains 1 Response_reg,2 Pyr_redox	0
RER_40240	4406389	4407825	+	two-component histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 cNMP_binding, 1 HisKA_MA, 1 HATPase_c, 	0
RER_41420	4557863	4559179	-	two-component histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA_3,1 HATPase_c	6
RER_43970	4828547	4829926	-	two-component histidine kinase MprB	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	3
RER_43980	4829992	4830678	-	two-component response regulator MprA	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
RER_44650	4896953	4898644	+	two-component histidine kinase	HK	Classic	Histidine kinase, Classic contains 2 GAF,1 HisKA_3,1 HATPase_c	0
RER_44660	4898647	4899285	-	NarL family two-component response regulator	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
RER_45160	4953334	4954329	-	two-component histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
RER_45170	4954326	4955012	-	OmpR family two-component response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
RER_45310	4969323	4970114	-	LytT family two-component response regulator	RR	LytTR	Response regulator, LytTR family contains 1 Response_reg,1 LytTR	0
RER_45320	4970166	4971383	-	two-component histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 Diacid_rec,1 His_kinase,1 HATPase_c	1
RER_45440	4984303	4987158	+	hypothetical protein	HK	Classic	Histidine kinase, Classic contains 1 HAMP, 1 HisKA_MA, 1 HATPase_c, 	1
RER_45840	5021337	5022041	+	two-component response regulator PrrA	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
RER_45850	5022038	5023381	+	two-component histidine kinase PrrB	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	3
RER_46020	5041645	5042322	+	two-component response regulator CseB	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
RER_46030	5042319	5043596	+	two-component histidine kinase CseC	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	3
RER_47110	5152017	5153141	+	two-component histidine kinase	PP	HisKa	Phosphotransfer protein contains 1 HisKA_3	0
RER_47120	5153138	5153767	+	NarL family two-component response regulator	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
RER_54190	5869201	5870385	+	two-component histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA_3,1 HATPase_c	5
RER_54200	5870382	5871011	+	NarL family two-component response regulator	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
RER_54710	5917260	5918522	-	LuxR family transcriptional regulator	HK	Classic	Histidine kinase, Classic contains 1 HisKA_MA, 1 HATPase_c, 1 HTH_LUXR, 	0
RER_59590	6432705	6433319	-	NarL family two-component response regulator	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
RER_59600	6433316	6434464	-	two-component histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA_3,1 HATPase_c	5
