#Mycobacterium chubuense NBB4 (57 genes)
Gene	Start	Stop	Strand	Original description	class	type	P2CS description	tm
Mycch_0107	100887	101528	+	response regulator containing a CheY-like                     receiver domain and an HTH DNA-binding domain	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
Mycch_0108	101531	102748	+	signal transduction histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA_3,1 HATPase_c	5
Mycch_0179	164777	165523	+	response regulator with CheY-like receiver                     domain and winged-helix DNA-binding domain	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
Mycch_0180	165501	166916	+	signal transduction histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
Mycch_0361	365806	366486	+	response regulator with CheY-like receiver                     domain and winged-helix DNA-binding domain	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
Mycch_0362	366552	367733	+	signal transduction histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	1
Mycch_0603	617838	619022	+	histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	1
Mycch_0604	619030	619716	+	response regulator with CheY-like receiver                     domain and winged-helix DNA-binding domain	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
Mycch_0657	660725	661750	-	signal transduction histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	3
Mycch_0658	661737	662453	-	response regulator with CheY-like receiver                     domain and winged-helix DNA-binding domain	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
Mycch_0744	737743	738681	+	response regulator containing a CheY-like                     receiver domain and an HTH DNA-binding domain	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
Mycch_0784	778985	779653	+	response regulator containing a CheY-like                     receiver domain and an HTH DNA-binding domain	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
Mycch_0983	988799	990040	-	histidine kinase with GAF domain	HK	Classic	Histidine kinase, Classic contains 1 GAF,1 HisKA_3,1 HATPase_c	0
Mycch_0984	990037	990699	-	response regulator containing a CheY-like                     receiver domain and an HTH DNA-binding domain	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
Mycch_0994	999887	1001353	-	histidine kinase with cyclic nucleotide-binding                     domain	HK	Classic	Histidine kinase, Classic contains 1 cNMP_binding, 1 HisKA_MA, 1 HATPase_c, 	0
Mycch_0995	1001421	1003085	-	thioredoxin reductase	RR	TrxB	Response regulator, TrxB family contains 1 Response_reg,2 Pyr_redox	0
Mycch_1030	1029696	1031186	+	signal transduction histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 CHASE3,1 HAMP,1 HisKA_3,1 HATPase_c	1
Mycch_1138	1138865	1141411	+	signal transduction histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP, 1 HisKA_MA, 1 HATPase_c, 	1
Mycch_1367	1395192	1395878	+	response regulator with CheY-like receiver                     domain and winged-helix DNA-binding domain	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
Mycch_1368	1395958	1397601	+	signal transduction histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
Mycch_1395	1424878	1426368	+	signal transduction histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA_2,1 HATPase_c	0
Mycch_1483	1522897	1524630	-	histidine kinase with GAF domain	HK	Classic	Histidine kinase, Classic contains 2 GAF,1 HisKA_3,1 HATPase_c	0
Mycch_1505	1550222	1551934	+	histidine kinase with GAF domain	HK	Classic	Histidine kinase, Classic contains 2 GAF,1 HisKA_3,1 HATPase_c	0
Mycch_1534	1584655	1585059	-	response regulator with CheY-like receiver                     domain and winged-helix DNA-binding domain	RR	CheY	Response regulator, CheY family contains 1 Response_reg	0
Mycch_1631	1685367	1689551	+	PAS/PAC sensor hybrid histidine kinase	HK	Hybrid	Histidine kinase, Hybrid contains 2 PAS_4,1 HisKA,2 HATPase_c,1 Response_reg,1 SpoIIE	0
Mycch_1835	1906157	1907521	+	signal transduction histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	3
Mycch_2087	2160962	2161630	-	response regulator with CheY-like receiver                     domain and winged-helix DNA-binding domain	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
Mycch_2226	2275809	2276576	+	response regulator with CheY-like receiver                     domain and winged-helix DNA-binding domain	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
Mycch_2227	2276573	2277727	+	signal transduction histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
Mycch_2229	2279213	2280214	+	response regulator with CheY-like receiver                     domain and winged-helix DNA-binding domain	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
Mycch_2230	2280175	2281632	-	signal transduction histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
Mycch_2275	2330242	2330892	-	response regulator containing a CheY-like                     receiver domain and an HTH DNA-binding domain	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
Mycch_2278	2332835	2334565	+	histidine kinase with GAF domain	HK	Classic	Histidine kinase, Classic contains 2 GAF,1 HisKA_3,1 HATPase_c	0
Mycch_2346	2411479	2412147	+	response regulator containing a CheY-like                     receiver domain and an HTH DNA-binding domain	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
Mycch_2347	2412144	2412599	+	response regulator containing a CheY-like                     receiver domain and an HTH DNA-binding domain	RR	CheY	Response regulator, CheY family contains 1 Response_reg	0
Mycch_2348	2412581	2413882	+	signal transduction histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA_3,1 HATPase_c	6
Mycch_2564	2652049	2652699	+	response regulator with putative antiterminator                     output domain	RR	AmiR_NasR	Response regulator, AmiR_NasR family contains 1 Response_reg,1 ANTAR	0
Mycch_2891	3010814	3011254	-	response regulator containing a CheY-like                     receiver domain and an HTH DNA-binding domain	RR	CheY	Response regulator, CheY family contains 1 Response_reg	0
Mycch_2892	3011251	3012840	-	bacteriophytochrome (light-regulated signal                     transduction histidine kinase)	HK	Classic	Histidine kinase, Classic contains 1 CHASE3,1 HAMP,1 HisKA,1 HATPase_c	2
Mycch_2893	3012837	3014012	-	serine phosphatase RsbU, regulator of sigma                     subunit	RR	RsbU	Response regulator, RsbU family contains 1 Response_reg,1 SpoIIE	0
Mycch_3519	3711580	3714198	-	serine phosphatase RsbU, regulator of sigma                     subunit	HK	Classic	Histidine kinase, Classic contains 2 GAF, 1 SpoIIE, 1 HisKA_MA, 1 HATPase_c, 	0
Mycch_3824	4031920	4033470	-	signal transduction histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	3
Mycch_3825	4033481	4034185	-	response regulator with CheY-like receiver                     domain and winged-helix DNA-binding domain	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
Mycch_3968	4187988	4189214	+	putative regulator of cell autolysis	HK	Classic	Histidine kinase, Classic contains 1 His_kinase,1 HATPase_c	1
Mycch_3969	4189211	4190056	+	response regulator of the LytR/AlgR family	RR	LytTR	Response regulator, LytTR family contains 1 Response_reg,1 LytTR	0
Mycch_4105	4315404	4316981	+	signal transduction histidine kinase regulating                     citrate/malate metabolism	HK	Classic	Histidine kinase, Classic contains 1 PAS, 1 HisKA_MA, 1 HATPase_c, 	2
Mycch_4106	4316978	4317670	+	response regulator of citrate/malate metabolism	RR	unclassified	Response regulator, unclassified contains 1 Response_reg,1 HTH_11	0
Mycch_4160	4363917	4366469	+	osmosensitive K+ channel histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	4
Mycch_4161	4366466	4367158	+	response regulator with CheY-like receiver                     domain and winged-helix DNA-binding domain	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
Mycch_4238	4442991	4444427	-	signal transduction histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
Mycch_4239	4444427	4445113	-	response regulator with CheY-like receiver                     domain and winged-helix DNA-binding domain	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
Mycch_4391	4610556	4611251	+	response regulator with CheY-like receiver                     domain and winged-helix DNA-binding domain	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
Mycch_4392	4611258	4612601	+	signal transduction histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
Mycch_4530	4759329	4760810	-	signal transduction histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
Mycch_4531	4760829	4761545	-	response regulator with CheY-like receiver                     domain and winged-helix DNA-binding domain	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
Mycch_4611	4852686	4853345	-	response regulator containing a CheY-like                     receiver domain and an HTH DNA-binding domain	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
Mycch_4627	4873130	4874131	-	response regulator containing a CheY-like                     receiver domain and an HTH DNA-binding domain	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
