#Halanaerobium praevalens DSM 2228 (35 genes)
Gene	Start	Stop	Strand	Original description	class	type	P2CS description	tm
Hprae_0025	34847	36235	+	integral membrane sensor signal transduction                     histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	2
Hprae_0026	36213	37520	+	two component Fis family sigma54-specific                     transcriptional regulator	RR	NtrC	Response regulator, NtrC family contains 1 Response_reg,1 AAA_5,1 HTH_8	0
Hprae_0056	69452	70453	+	response regulator receiver modulated                     diguanylate cyclase	RR	PleD	Response regulator, PleD family contains 1 Response_reg,1 GGDEF	0
Hprae_0057	70499	70804	+	Hpt protein	PP	HPt	Phosphotransfer protein contains 1 Hpt	0
Hprae_0058	70820	73585	+	PAS/PAC sensor hybrid histidine kinase	HK	Hybrid	Histidine kinase, Hybrid contains 1 PAS_4,2 PAS_3,1 HisKA,1 HATPase_c,2 Response_reg	0
Hprae_0102	125242	125952	-	LytTR family two component transcriptional                     regulator	RR	LytTR	Response regulator, LytTR family contains 1 Response_reg,1 LytTR	0
Hprae_0159	187987	189987	+	response regulator receiver modulated                     diguanylate cyclase with PAS/PAC sensor	RR	PleD	Response regulator, PleD family contains 1 Response_reg,2 PAS_4,1 PAS,1 GGDEF	0
Hprae_0186	214989	215759	-	LytTR family two component transcriptional                     regulator	RR	LytTR	Response regulator, LytTR family contains 1 Response_reg,1 LytTR	0
Hprae_0187	215756	217462	-	signal transduction histidine kinase LytS	HK	Classic	Histidine kinase, Classic contains 1 His_kinase,1 HATPase_c	6
Hprae_0229	271558	271914	+	response regulator receiver protein	RR	CheY	Response regulator, CheY family contains 1 Response_reg	0
Hprae_0233	277183	278058	-	fused response regulator receiver/hypothetical                     protein	RR	CheC	Response regulator, CheC family contains 1 Response_reg,1 CheC	0
Hprae_0274	320219	320803	+	response regulator receiver and ANTAR                     domain-containing protein	RR	AmiR_NasR	Response regulator, AmiR_NasR family contains 1 Response_reg,1 ANTAR	0
Hprae_0275	320805	322223	+	signal transduction histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA_2,1 HATPase_c	0
Hprae_0320	368182	369963	+	multi-sensor signal transduction histidine                     kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 PAS,1 HisKA,1 HATPase_c	3
Hprae_0321	370050	370727	+	winged helix family two component                     transcriptional regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
Hprae_0464	526639	527268	-	fused response regulator receiver/hypothetical                     protein	RR	IclR	Response regulator, IclR family contains 1 Response_reg,1 HTH_IclR	0
Hprae_0465	527243	528628	-	integral membrane sensor signal transduction                     histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	7
Hprae_0535	607447	609438	+	CheA signal transduction histidine kinase	HK	CheA	Histidine kinase, CheA contains 1 Hpt,1 H-kinase_dim,1 HATPase_c,1 CheW	0
Hprae_0539	611360	611713	+	response regulator receiver protein	RR	CheY	Response regulator, CheY family contains 1 Response_reg	0
Hprae_0612	681097	682662	+	PAS/PAC sensor signal transduction histidine                     kinase	HK	Classic	Histidine kinase, Classic contains 1 PAS_4,1 PAS,1 HisKA,1 HATPase_c	0
Hprae_0855	953616	956747	+	Hpt sensor hybrid histidine kinase	HK	Unorthodox	Histidine kinase, Unorthodox contains 1 Cache_1,1 HisKA,1 HATPase_c,2 Response_reg,1 Hpt	2
Hprae_0856	956737	957831	+	response regulator receiver modulated metal                     dependent phosphohydrolase	RR	RpfG	Response regulator, RpfG family contains 1 Response_reg,1 HD	0
Hprae_0900	999952	1000737	+	response regulator receiver protein	RR	Spo0A	Response regulator, Spo0A family contains 1 Response_reg,1 Spo0A_C	0
Hprae_1011	1118352	1119029	+	winged helix family two component                     transcriptional regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
Hprae_1012	1119029	1120426	+	integral membrane sensor signal transduction                     histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
Hprae_1402	1548819	1549514	-	response regulator receiver protein	RR	unclassified	Response regulator, unclassified contains 1 Response_reg,1 TPR_2	0
Hprae_1403	1549504	1549911	-	response regulator receiver protein	RR	CheY	Response regulator, CheY family contains 1 Response_reg	0
Hprae_1404	1549904	1551730	-	multi-sensor signal transduction histidine                     kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 PAS,1 HisKA,1 HATPase_c	1
Hprae_1472	1624776	1626173	-	integral membrane sensor signal transduction                     histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
Hprae_1473	1626166	1626855	-	winged helix family two component                     transcriptional regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
Hprae_1775	1945439	1947220	-	multi-sensor signal transduction histidine                     kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 PAS_4,1 HisKA,1 HATPase_c	3
Hprae_1776	1947204	1947893	-	winged helix family two component                     transcriptional regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
Hprae_1882	2056862	2057812	-	response regulator receiver modulated CheW                     protein	RR	CheV	Response regulator, CheV family contains 1 CheW,1 Response_reg	0
Hprae_1891	2067894	2068904	+	response regulator receiver modulated CheB                     methylesterase	RR	CheB	Response regulator, CheB family contains 1 Response_reg,1 CheB_methylest	0
Hprae_1990	2183365	2184048	-	winged helix family two component                     transcriptional regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
