#Escherichia coli O104:H4 str. 2009EL-2071 (64 genes) Gene Start Stop Strand Original description class type P2CS description tm O3O_00795 5132504 5133913 + nitrogen regulation protein NR(I) RR NtrC Response regulator, NtrC family contains 1 Response_reg,1 AAA_5,1 HTH_8 0 O3O_00800 5131443 5132492 + nitrogen regulation protein NR(II) HK Classic Histidine kinase, Classic contains 1 PAS,1 HisKA,1 HATPase_c 0 O3O_01035 5084712 5086085 + two-component sensor protein HK Classic Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c 2 O3O_01040 5084017 5084715 + DNA-binding transcriptional regulator CpxR RR OmpR Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C 0 O3O_01505 4978277 4979653 - sensor protein ZraS HK Classic Histidine kinase, Classic contains 1 HisKA,1 HATPase_c 3 O3O_01510 4976955 4978280 - transcriptional regulatory protein ZraR RR NtrC Response regulator, NtrC family contains 1 Response_reg,1 AAA_5,1 HTH_8 0 O3O_02045 4853918 4855009 + sensor protein BasS/PmrB HK Classic Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c 2 O3O_02050 4853240 4853908 + DNA-binding transcriptional regulator BasR RR OmpR Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C 0 O3O_02105 4837155 4837874 + DNA-binding transcriptional activator DcuR RR CitT Response regulator, CitT family contains 1 Response_reg,1 CitT 0 O3O_02110 4835527 4837158 + sensory histidine kinase DcuS HK Classic Histidine kinase, Classic contains 1 PAS, 1 HisKA_MA, 1 HATPase_c, 3 O3O_03825 4492171 4492860 - DNA-binding response regulator CreB RR OmpR Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C 0 O3O_03830 4490747 4492171 - sensory histidine kinase CreC HK Classic Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c 2 O3O_03840 4488561 4489277 + two-component response regulator RR OmpR Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C 0 O3O_05775 4050227 4050916 - transcriptional regulator PhoB RR OmpR Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C 0 O3O_05780 4048874 4050169 - phosphate regulon sensor protein HK Classic Histidine kinase, Classic contains 1 PAS,1 HisKA,1 HATPase_c 1 O3O_06470 3901708 3902340 + transcriptional regulator FimZ RR NarL Response regulator, NarL family contains 1 Response_reg,1 GerE 0 O3O_06530 3882672 3884120 + sensor kinase CusS HK Classic Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c 3 O3O_06535 3881999 3882682 + DNA-binding transcriptional activator CusR RR OmpR Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C 0 O3O_06800 3821962 3823620 - sensor histidine kinase DpiB HK Classic Histidine kinase, Classic contains 1 HisKA_MA, 1 HATPase_c 3 O3O_06805 3821313 3821993 - two-component response regulator DpiA RR CitT Response regulator, CitT family contains 1 Response_reg,1 CitT 0 O3O_07115 3755176 3755853 + DNA-binding transcriptional activator KdpE RR OmpR Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C 0 O3O_07120 3752495 3755179 + sensor protein KdpD HK Classic Histidine kinase, Classic contains 1 HisKA,1 HATPase_c 4 O3O_08920 3378053 3380797 + hybrid sensory histidine kinase TorS HK Unorthodox Histidine kinase, Unorthodox contains 1 HAMP,1 HisKA,1 HATPase_c,1 Response_reg,1 Hpt 2 O3O_08930 3376277 3376969 + DNA-binding transcriptional regulator TorR RR OmpR Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C 0 O3O_10705 3046757 3048217 + sensor protein PhoQ HK Classic Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c 2 O3O_10710 3046086 3046757 + DNA-binding transcriptional regulator PhoP RR OmpR Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C 0 O3O_11085 2975892 2976542 + DNA-binding response regulator NarL/sensory histidine kinase NarX RR NarL Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR 0 O3O_11090 2974103 2975899 + nitrate/nitrite sensor protein NarX HK Classic Histidine kinase, Classic contains 1 HAMP,1 HisKA_3,1 HATPase_c 2 O3O_11140 2960997 2962010 - response regulator of RpoS RR unclassified Response regulator, unclassified contains 1 Response_reg,1 PP2C_SIG 0 O3O_13440 2503157 2503876 - DNA-binding transcriptional regulator RstA RR OmpR Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C 0 O3O_13445 2501852 2503153 - sensor protein RstB HK Classic Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c 3 O3O_15435 2128388 2128777 + chemotaxis regulatory protein CheY RR CheY Response regulator, CheY family contains 1 Response_reg 0 O3O_15440 2127324 2128373 + chemotaxis-specific methylesterase RR CheB Response regulator, CheB family contains 1 Response_reg,1 CheB_methylest 0 O3O_15465 2120501 2122465 + chemotaxis protein CheA HK CheA Histidine kinase, CheA contains 1 Hpt,1 H-kinase_dim,1 HATPase_c,1 CheW 0 O3O_15565 2101243 2101899 + response regulator RR NarL Response regulator, NarL family contains 1 Response_reg,1 GerE 0 O3O_15855 2055350 2056708 + sensory kinase in two-component regulatory system with YedW HK Classic Histidine kinase, Classic contains 1 MCPsignal,1 HAMP,1 HisKA,1 HATPase_c 1 O3O_15860 2054679 2055350 + transcriptional regulatory protein YedW RR OmpR Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C 0 O3O_16580 1886943 1888346 - signal transduction histidine-protein kinase BaeS HK Classic Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c 2 O3O_16585 1886224 1886946 - DNA-binding transcriptional regulator BaeR RR OmpR Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C 0 O3O_16810 1837677 1838396 + two-component response-regulatory protein YehT RR LytTR Response regulator, LytTR family contains 1 Response_reg,1 LytTR 0 O3O_16815 1835995 1837680 + sensory kinase in two-component system with YehT HK Classic Histidine kinase, Classic contains 1 GAF,1 His_kinase,1 HATPase_c 7 O3O_17150 1760790 1761437 - transcriptional regulator NarP RR NarL Response regulator, NarL family contains 1 Response_reg,1 GerE 0 O3O_17270 1736519 1739191 - phosphotransfer intermediate protein in two-component regulatory system with RcsBC HK Classic Histidine kinase, Classic contains 1 HisKA_MA, 1 HATPase_c, 1 Hpt, 1 O3O_17275 1735852 1736502 - transcriptional regulator RcsB RR NarL Response regulator, NarL family contains 1 Response_reg,1 GerE 0 O3O_17280 1732803 1735652 + hybrid sensory kinase in two-component regulatory system with RcsB and YojN HK Hybrid Histidine kinase, Hybrid contains 1 HisKA,1 HATPase_c,1 Response_reg 3 O3O_18110 1560835 1561449 - DNA-binding transcriptional activator EvgA RR NarL Response regulator, NarL family contains 1 Response_reg,1 GerE 0 O3O_18115 1557237 1560830 - hybrid sensory histidine kinase in two-component regulatory system with EvgA HK Unorthodox Histidine kinase, Unorthodox contains 2 PBPb,1 HisKA,1 HATPase_c,1 Response_reg,1 Hpt 2 O3O_18165 1544838 1546535 - hypothetical protein HK Classic Histidine kinase, Classic contains 1 His_kinase,1 HATPase_c 5 O3O_18170 1544089 1544823 - hypothetical protein RR LytTR Response regulator, LytTR family contains 1 Response_reg,1 LytTR 0 O3O_18545 1465890 1467590 - nitrate/nitrite sensor protein NarQ HK Classic Histidine kinase, Classic contains 1 HAMP,1 HisKA_3,1 HATPase_c 2 O3O_19005 1364362 1365696 + response regulator GlrR RR unclassified Response regulator, unclassified contains 1 Response_reg,1 AAA_5 0 O3O_19015 1362067 1363494 + 2-component sensor protein HK Classic Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c 2 O3O_20070 1140807 1143563 - hybrid sensory histidine kinase BarA HK Unorthodox Histidine kinase, Unorthodox contains 1 HAMP,1 HisKA,1 HATPase_c,1 Response_reg,1 Hpt 2 O3O_21825 776107 776766 - DNA-binding transcriptional regulator QseB RR OmpR Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C 0 O3O_21830 774761 776110 - sensor protein QseC HK Classic Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c 2 O3O_22755 586211 588547 + aerobic respiration control sensor protein ArcB HK Unorthodox Histidine kinase, Unorthodox contains 1 PAS,1 HisKA,1 HATPase_c,1 Response_reg,1 Hpt 2 O3O_23610 425286 426638 + osmolarity sensor protein HK Classic Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c 2 O3O_23615 424570 425289 + osmolarity response regulator RR OmpR Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C 0 O3O_24050 326090 327490 + sensor protein pcoS HK Classic Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c 2 O3O_24055 325413 326093 + transcriptional regulator PcoR RR OmpR Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C 0 O3O_24130 309009 309689 - DNA-binding transcriptional activator CusR RR OmpR Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C 0 O3O_24135 307535 309016 - sensor kinase CusS HK Classic Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c 3 O3O_25420 34523 36025 + sensory histidine kinase UhpB HK Classic Histidine kinase, Classic contains 1 MASE1,1 HisKA_3,1 HATPase_c 7 O3O_25425 33933 34523 + DNA-binding transcriptional activator UhpA RR NarL Response regulator, NarL family contains 1 Response_reg,1 GerE 0