#Erwinia pyrifoliae DSM 12163 (44 genes)
Gene	Start	Stop	Strand	Original description	class	type	P2CS description	tm
EPYR_00029	48327	49736	-	Transcriptional regulatory protein glnG	RR	NtrC	Response regulator, NtrC family contains 1 Response_reg,1 AAA_5,1 HTH_8	0
EPYR_00030	49744	50793	-	histidine protein kinase sensor for GlnG                     regulator (nitrogen regulator II, NRII)	HK	Classic	Histidine kinase, Classic contains 1 PAS,1 HisKA,1 HATPase_c	0
EPYR_00049	71176	71820	+	Fimbriae Z protein	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
EPYR_00108	121468	122895	-	two-component sensor kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
EPYR_00109	122844	123545	-	Alkaline phosphatase synthesis transcriptional                     regulatory protein phoP	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
EPYR_00336	395283	397622	+	aerobic respiration sensor-response protein	HK	Unorthodox	Histidine kinase, Unorthodox contains 1 PAS,1 HisKA,1 HATPase_c,1 Response_reg,1 Hpt	2
EPYR_00724	793878	794594	-	transcriptional regulator ycf27	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
EPYR_00980	1074939	1075331	-	Chemotaxis regulator CheY	RR	CheY	Response regulator, CheY family contains 1 Response_reg	0
EPYR_00981	1075382	1076431	-	protein-glutamate methylesterase CheB	RR	CheB	Response regulator, CheB family contains 1 Response_reg,1 CheB_methylest	0
EPYR_01027	1117358	1119328	+	chemotaxis protein CheA	HK	CheA	Histidine kinase, CheA contains 1 Hpt,1 H-kinase_dim,1 HATPase_c,1 CheW	0
EPYR_01080	1171045	1172484	+	putative 2-component sensor protein	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
EPYR_01082	1173194	1174528	+	Two-component system response regulator	RR	unclassified	Response regulator, unclassified contains 1 Response_reg,1 AAA_5	0
EPYR_01197	1308412	1309041	-	Nitrate/nitrite response regulator protein                     homolog	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
EPYR_01198	1309059	1310039	-	sensor for nitrate reductase system, protein                     histidine kinase (acts on NarP and NarL)	HK	Classic	Histidine kinase, Classic contains 1 HisKA_3,1 HATPase_c	0
EPYR_01215	1325489	1326169	+	Sensory transduction protein regX3	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
EPYR_01216	1326166	1327527	+	putative two-component system sensor kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
EPYR_01259	1370994	1371830	+	hypothetical protein	RR	BetR	Response regulator, BetR family contains 1 BetR,1 Response_reg	0
EPYR_01262	1372729	1373988	+	Sensor protein ciaH	HK	Classic	Histidine kinase, Classic contains 1 HisKA_MA, 1 HATPase_c	3
EPYR_01370	1488308	1491286	+	Two component sensor kinase/response regulator                     protein RcsC	HK	Hybrid	Histidine kinase, Hybrid contains 1 HisKA,1 HATPase_c,1 Response_reg	4
EPYR_01371	1491439	1492086	-	activator of exoploysaccharide synthesis	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 GerE	0
EPYR_01372	1492088	1494745	-	putative two-component system sensor kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c,1 Hpt	1
EPYR_01465	1572020	1572727	-	transcriptional regulator ycf27	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
EPYR_01466	1572742	1574127	-	putative two-component system sensor kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
EPYR_01655	1750785	1752740	+	chemotaxis protein CheA	HK	CheA	Histidine kinase, CheA contains 1 Hpt,1 H-kinase_dim,1 HATPase_c,1 CheW	0
EPYR_01663	1763436	1764485	+	protein-glutamate methylesterase CheB	RR	CheB	Response regulator, CheB family contains 1 Response_reg,1 CheB_methylest	0
EPYR_01664	1764588	1764977	+	Chemotaxis regulator CheY	RR	CheY	Response regulator, CheY family contains 1 Response_reg	0
EPYR_01768	1869868	1870896	+	Protein hnr	RR	unclassified	Response regulator, unclassified contains 1 Response_reg	0
EPYR_01871	1976341	1977621	-	two component sensor kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	3
EPYR_01913	2005484	2006212	-	transcriptional regulator ycf27	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
EPYR_02167	2263514	2265253	+	putative 2-component sensor protein	HK	Classic	Histidine kinase, Classic contains 1 PAS, 1 HisKA_MA, 1 HATPase_c, 	5
EPYR_02168	2265250	2265969	+	Transcriptional regulatory protein citT	RR	unclassified	Response regulator, unclassified contains 1 Response_reg	0
EPYR_02251	2332491	2333159	+	Response regulator phoP	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
EPYR_02252	2333104	2334609	+	sensor protein kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
EPYR_02267	2348953	2349909	-	putative chemotaxis signal transduction protein	RR	CheV	Response regulator, CheV family contains 1 CheW,1 Response_reg	0
EPYR_02380	2449639	2450298	-	putative 2-component transcriptional regulator                     UvrY	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 GerE	0
EPYR_02657	2724558	2725238	+	Transcriptional regulatory protein kdpE	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
EPYR_02887	2938473	2939807	-	Phosphate regulon histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 PAS,1 HisKA,1 HATPase_c	1
EPYR_02888	2939830	2940519	-	Phosphate regulon transcriptional regulatory                     protein phoB	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
EPYR_03078	3124729	3127503	+	sensor histidine kinase/response regulator	HK	Unorthodox	Histidine kinase, Unorthodox contains 1 HAMP,1 HisKA,1 HATPase_c,1 Response_reg,1 Hpt	2
EPYR_03330	3377765	3378406	-	Response regulator hrpY	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
EPYR_03331	3378410	3379894	-	Sensor kinase HrpX	HK	Classic	Histidine kinase, Classic contains 1 PAS,1 PAS_4,1 HisKA_3,1 HATPase_c	0
EPYR_03687	3733590	3734981	-	protein histidine kinase/phosphatase sensor for                     OmpR	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
EPYR_03688	3734936	3735655	-	two-component response regulator OmpR	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
EPYR_03838	3885156	3887855	-	two-component system, sensor kinase protein                     KdpD	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	4
