#Enterococcus faecium DO (34 genes)
Gene	Start	Stop	Strand	Original description	class	type	P2CS description	tm
HMPREF0351_10436	426436	427155	+	response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
HMPREF0351_10437	427158	428111	+	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	3
HMPREF0351_10460	453947	454675	-	accessory gene regulator protein A	RR	LytTR	Response regulator, LytTR family contains 1 Response_reg,1 LytTR	0
HMPREF0351_10461	454688	455968	-	accessory gene regulator C	HK	Classic	Histidine kinase, Classic contains 1 HisKA_MA, 1 HATPase_c	6
HMPREF0351_10536	531978	532667	+	response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
HMPREF0351_10537	532685	533710	+	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	2
HMPREF0351_10618	619836	620576	-	response regulator	RR	LytTR	Response regulator, LytTR family contains 1 Response_reg,1 LytTR	0
HMPREF0351_10937	913746	914813	+	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA_3,1 HATPase_c	2
HMPREF0351_10938	914820	915452	+	LuxR family response regulator	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
HMPREF0351_11007	987830	988516	+	response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
HMPREF0351_11008	988513	990018	+	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	3
HMPREF0351_11182	1166701	1167417	-	response regulator	RR	unclassified	Response regulator, unclassified contains 1 Response_reg	0
HMPREF0351_11183	1167386	1168219	-	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA_MA, 1 HATPase_c	0
HMPREF0351_11216	1200320	1201885	-	response regulator	RR	YesN	Response regulator, YesN family contains 1 Response_reg,2 HTH_AraC	0
HMPREF0351_11217	1201878	1203329	-	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 His_kinase,1 HATPase_c	1
HMPREF0351_11399	1387372	1388046	+	response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
HMPREF0351_11400	1388051	1389391	+	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	2
HMPREF0351_11584	1554214	1554792	+	response regulator	RR	unclassified	Response regulator, unclassified contains 1 Response_reg	0
HMPREF0351_11586	1555718	1557454	+	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 His_kinase,1 HATPase_c	1
HMPREF0351_11747	1722652	1724100	-	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	3
HMPREF0351_11748	1724100	1724816	-	response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
HMPREF0351_11843	1810047	1810751	+	response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
HMPREF0351_11844	1810748	1812484	+	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	2
HMPREF0351_12154	2093673	2094512	-	response regulator	RR	LytTR	Response regulator, LytTR family contains 1 Response_reg,1 LytTR	0
HMPREF0351_12361	2306704	2308539	-	sensor histidine kinase VicK	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 PAS,1 HisKA,1 HATPase_c	3
HMPREF0351_12362	2308544	2309278	-	response regulator VicR	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
HMPREF0351_12406	2346469	2347563	+	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA_3,1 HATPase_c	3
HMPREF0351_12407	2347560	2348189	+	response regulator	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
HMPREF0351_12502	2461041	2462492	-	response regulator	RR	YesN	Response regulator, YesN family contains 1 Response_reg,2 HTH_AraC	0
HMPREF0351_12503	2462489	2464213	-	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 His_kinase,1 HATPase_c	3
HMPREF0351_12643	2620621	2621517	-	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	1
HMPREF0351_12644	2621510	2622190	-	response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
HMPREF0351_12687	2680606	2681316	+	response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
HMPREF0351_12688	2681303	2682511	+	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	3
