#Enterobacter cloacae subsp. cloacae ATCC 13047 (85 genes)
Gene	Start	Stop	Strand	Original description	class	type	P2CS description	tm
ECL_00036	34535	35128	+	DNA-binding transcriptional activator UhpA	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 GerE	0
ECL_00037	35125	36630	+	sensory histidine kinase UhpB	HK	Classic	Histidine kinase, Classic contains 1 MASE1,1 HisKA_3,1 HATPase_c	7
ECL_00337	347728	348459	+	two component transcriptional regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
ECL_00346	357115	359391	+	integral membrane sensor hybrid histidine                     kinase	HK	Hybrid	Histidine kinase, Hybrid contains 1 HAMP,1 HisKA,1 HATPase_c,1 Response_reg	3
ECL_00716	708810	709190	+	response regulator receiver protein	RR	CheY	Response regulator, CheY family contains 1 Response_reg	0
ECL_00717	709200	714782	+	PAS sensor protein	HK	Classic	Histidine kinase, Classic contains 1 S_TKc,1 GAF,1 PAS_3,1 HisKA,1 HATPase_c	0
ECL_00718	714786	715391	-	two component transcriptional regulator, LuxR                     family	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
ECL_00811	802256	802972	-	two-component response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
ECL_00924	929917	930537	+	LuxR family transcriptional regulator	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
ECL_01121	1154764	1156305	-	integral membrane sensor signal transduction                     histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 MASE1,1 HisKA_3,1 HATPase_c	8
ECL_01122	1156305	1156934	-	two component LuxR family transcriptional                     regulator	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 GerE	0
ECL_01154	1188350	1189039	+	transcriptional regulator PhoB	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
ECL_01155	1189061	1190356	+	phosphate regulon sensor protein	HK	Classic	Histidine kinase, Classic contains 1 PAS,1 HisKA,1 HATPase_c	1
ECL_01284	1321860	1322492	-	two-component system, NarL family, response                     regulator, fimbrial Z	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 GerE	0
ECL_01374	1392827	1393483	+	two component transcriptional regulator, LuxR                     family	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 GerE	0
ECL_01404	1422251	1424281	+	chemotaxis protein CheA	HK	CheA	Histidine kinase, CheA contains 1 Hpt,1 H-kinase_dim,1 HATPase_c,1 CheW	0
ECL_01415	1436109	1437158	+	chemotaxis-specific methylesterase	RR	CheB	Response regulator, CheB family contains 1 Response_reg,1 CheB_methylest	0
ECL_01416	1437176	1437565	+	chemotaxis regulatory protein CheY	RR	CheY	Response regulator, CheY family contains 1 Response_reg	0
ECL_01619	1640255	1640905	-	nitrate/nitrite response regulator	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
ECL_01620	1640898	1642694	-	nitrate/nitrite sensor protein NarX	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA_3,1 HATPase_c	2
ECL_01631	1655844	1656857	+	response regulator of RpoS	RR	unclassified	Response regulator, unclassified contains 1 Response_reg	0
ECL_01761	1776201	1776905	+	hypothetical protein	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
ECL_01762	1776902	1777969	+	integral membrane sensor signal transduction                     histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	1
ECL_01958	1994379	1995836	-	two-component system, OmpR family, heavy metal                     sensor histidine kinase CusS	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
ECL_01959	1995826	1996509	-	two-component system, OmpR family, copper                     resistance phosphate	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
ECL_01976	2012848	2014143	-	histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	3
ECL_01977	2014140	2014880	-	OmpR family transcriptional regulatory protein	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
ECL_02127	2176247	2177635	-	hypothetical protein	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
ECL_02128	2177635	2178312	-	Transcriptional regulatory protein qseB	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
ECL_02241	2292174	2292869	+	DNA-binding response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
ECL_02242	2292866	2294062	+	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	2
ECL_02269	2323437	2324153	+	DNA-binding transcriptional regulator RstA	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
ECL_02271	2324771	2326069	+	sensor protein RstB	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	5
ECL_02352	2398705	2399316	-	two component transcriptional regulator, luxr                     family	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
ECL_02353	2399309	2400637	-	hypothetical protein	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	3
ECL_02497	2544537	2545172	-	two component transcriptional regulator, LuxR                     family	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
ECL_02504	2551308	2551979	+	DNA-binding transcriptional regulator PhoP	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
ECL_02505	2551992	2553443	+	sensor protein PhoQ	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
ECL_02812	2867374	2869533	-	hypothetical protein	HK	Hybrid	Histidine kinase, Hybrid contains 1 Response_reg,1 Trans_reg_C,1 HAMP,1 HisKA,1 HATPase_c	2
ECL_03023	3073378	3076065	+	sensor protein KdpD	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	4
ECL_03024	3076062	3076739	+	two component transcriptional regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
ECL_03247	3302150	3303766	+	sensory histidine kinase DcuS	HK	Classic	Histidine kinase, Classic contains 1 PAS, 1 HisKA_MA, 1 HATPase_c, 	2
ECL_03248	3303763	3304482	+	DNA-binding transcriptional activator DcuR	RR	unclassified	Response regulator, unclassified contains 1 Response_reg	0
ECL_03260	3318331	3320259	-	chemotaxis protein CheA	HK	CheA	Histidine kinase, CheA contains 1 Hpt,1 H-kinase_dim,1 HATPase_c,1 CheW	0
ECL_03306	3357905	3358981	+	chemotaxis-specific methylesterase	RR	CheB	Response regulator, CheB family contains 1 Response_reg,1 CheB_methylest	0
ECL_03307	3358971	3359357	+	Chemotaxis protein CheY	RR	CheY	Response regulator, CheY family contains 1 Response_reg	0
ECL_03405	3478460	3479863	+	signal transduction histidine-protein kinase                     BaeS	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
ECL_03406	3479860	3480582	+	DNA-binding transcriptional regulator BaeR	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
ECL_03435	3513892	3514611	-	putative two-component response-regulatory                     protein YehT	RR	LytTR	Response regulator, LytTR family contains 1 Response_reg,1 LytTR	0
ECL_03436	3514605	3516290	-	signal transduction histidine kinase LytS	HK	Classic	Histidine kinase, Classic contains 1 GAF,1 His_kinase,1 HATPase_c	7
ECL_03520	3603890	3606454	+	two-component system, NarL family, sensor                     histidine kinase RcsD	HK	Classic	Histidine kinase, Classic contains 1 HisKA_MA, 1 HATPase_c, 1 Hpt, 	0
ECL_03521	3606471	3607121	+	two-component system, NarL family, captular                     synthesis response regulator RcsB	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 GerE	0
ECL_03522	3607211	3610057	-	two-component system, NarL family, capsular                     synthesis sensor histidine kinase RcsC	HK	Hybrid	Histidine kinase, Hybrid contains 1 HisKA,1 HATPase_c,1 Response_reg	3
ECL_03538	3630775	3632184	-	two-component system, OmpR family, sensor                     histidine kinase TctE	HK	Classic	Histidine kinase, Classic contains 1 2CSK_N,1 HAMP,1 HisKA,1 HATPase_c	2
ECL_03539	3632171	3632845	-	two-component system, OmpR family, response                     regulator TctD	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
ECL_03619	3694680	3695684	+	putative chemotaxis signal trancription protein	RR	CheV	Response regulator, CheV family contains 1 CheW,1 Response_reg	0
ECL_03724	3798565	3800244	+	putative sensory kinase in two-component system	HK	Classic	Histidine kinase, Classic contains 1 His_kinase,1 HATPase_c	7
ECL_03725	3800258	3800989	+	putative response regulator in two-component                     system	RR	LytTR	Response regulator, LytTR family contains 1 Response_reg,1 LytTR	0
ECL_03766	3845792	3847480	+	nitrate/nitrite sensor protein NarQ	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA_3,1 HATPase_c	2
ECL_03891	3980731	3982068	-	two-component system, NtrC family, response                     regulator YfhA	RR	unclassified	Response regulator, unclassified contains 1 Response_reg,1 AAA_5	0
ECL_03893	3982794	3984176	-	two-component system, NtrC family, sensor                     histidine kinase YfhK	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	1
ECL_04118	4221879	4224638	+	hybrid sensory histidine kinase BarA	HK	Unorthodox	Histidine kinase, Unorthodox contains 1 HAMP,1 HisKA,1 HATPase_c,1 Response_reg,1 Hpt	2
ECL_04301	4409983	4411569	+	two-component system, CitB family, cit operon                     sensor histidine kinase CitA	HK	Classic	Histidine kinase, Classic contains 1 PAS, 1 HisKA_MA, 1 HATPase_c, 	3
ECL_04302	4411610	4412302	+	two-component system, CitB family, response                     regulator CitB	RR	IclR	Response regulator, IclR family contains 1 Response_reg,1 CitT,1 HTH_IclR	0
ECL_04307	4416900	4418687	-	integral membrane sensor hybrid histidine                     kinase	HK	Hybrid	Histidine kinase, Hybrid contains 1 HisKA,1 HATPase_c,1 Response_reg	7
ECL_04308	4418684	4419316	-	two component LuxR family transcriptional                     regulator	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
ECL_04343	4456199	4456858	+	two-component system, OmpR family, response                     regulator QseB	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
ECL_04344	4456855	4458192	+	two-component system, OmpR family, sensor                     histidine kinase QseC	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
ECL_04395	4512632	4513339	+	hypothetical protein	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
ECL_04447	4554857	4558045	-	two-component system, NarL family, sensor                     histidine kinase EvgS	HK	Unorthodox	Histidine kinase, Unorthodox contains 1 SBP_bac_3,1 PBPb,1 HisKA,1 HATPase_c,1 Response_reg,1 Hpt	1
ECL_04448	4558042	4558671	-	two-component system, NarL family, response                     regulator EvgA	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 GerE	0
ECL_04463	4584786	4585463	+	hypothetical protein	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
ECL_04562	4685069	4685731	+	DNA-binding transcriptional regulator BasR	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
ECL_04563	4685728	4686771	+	sensor protein BasS/PmrB	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
ECL_04591	4706032	4708365	-	aerobic respiration control sensor protein ArcB	HK	Unorthodox	Histidine kinase, Unorthodox contains 1 PAS,1 HisKA,1 HATPase_c,1 Response_reg,1 Hpt	2
ECL_04768	4878634	4879971	-	osmolarity sensor protein	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
ECL_04769	4879977	4880696	-	osmolarity response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
ECL_04876	4983842	4985242	-	two-component system, OmpR family, heavy metal                     sensor histidine kinase CusS	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
ECL_04877	4985239	4985919	-	two-component system, OmpR family, copper                     resistance phosphate regulon response regulator CusR	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
ECL_04897	5002996	5003676	+	DNA-binding transcriptional activator CusR	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
ECL_04898	5003669	5005150	+	sensor kinase CusS	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	3
ECL_05064	5202952	5203584	+	two-component system, OmpR family, response                     regulator CpxR	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
ECL_05065	5203581	5204954	+	two-component system, OmpR family, sensor                     histidine kinase CpxA	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
ECL_05112	5252492	5253541	+	nitrogen regulation protein NR(II)	HK	Classic	Histidine kinase, Classic contains 1 PAS,1 HisKA,1 HATPase_c	0
ECL_05113	5253553	5254965	+	nitrogen regulation protein NR(I)	RR	NtrC	Response regulator, NtrC family contains 1 Response_reg,1 AAA_5,1 HTH_8	0
