#Enterobacter aerogenes KCTC 2190 (64 genes)
Gene	Start	Stop	Strand	Original description	class	type	P2CS description	tm
EAE_00050	9005	10507	+	two-component system, CitB family, cit operon                     sensor histidine kinase CitA	HK	Classic	Histidine kinase, Classic contains 1 PAS, 1 HisKA_MA, 1 HATPase_c, 	2
EAE_00055	10497	11189	+	two-component system, CitB family, response                     regulator CitB	RR	CitT	Response regulator, CitT family contains 1 Response_reg,1 CitT	0
EAE_00255	45760	47457	+	signal transduction histidine kinase LytS	HK	Classic	Histidine kinase, Classic contains 1 GAF,1 His_kinase,1 HATPase_c	5
EAE_00260	47469	48212	+	DNA-binding response regulator	RR	LytTR	Response regulator, LytTR family contains 1 Response_reg,1 LytTR	0
EAE_00845	179518	180855	-	response regulator GlrR	RR	unclassified	Response regulator, unclassified contains 1 Response_reg,1 AAA_5	0
EAE_00855	181552	182988	-	putative 2-component sensor protein	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
EAE_01975	411412	414162	+	hybrid sensory histidine kinase BarA	HK	Unorthodox	Histidine kinase, Unorthodox contains 1 HAMP,1 HisKA,1 HATPase_c,1 Response_reg,1 Hpt	2
EAE_03545	743000	743659	+	DNA-binding transcriptional regulator QseB	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
EAE_04480	930347	932683	-	aerobic respiration control sensor protein ArcB	HK	Unorthodox	Histidine kinase, Unorthodox contains 1 PAS,1 HisKA,1 HATPase_c,1 Response_reg,1 Hpt	2
EAE_05240	1075309	1076670	-	osmolarity sensor protein	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
EAE_05245	1076667	1077386	-	osmolarity response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
EAE_06875	1425257	1426762	-	sensory histidine kinase UhpB	HK	Classic	Histidine kinase, Classic contains 1 MASE1,1 HisKA_3,1 HATPase_c	7
EAE_06880	1426759	1427352	-	DNA-binding transcriptional activator UhpA	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 GerE	0
EAE_07340	1528637	1530046	-	nitrogen regulation protein NR(I)	RR	NtrC	Response regulator, NtrC family contains 1 Response_reg,1 AAA_5,1 HTH_8	0
EAE_07345	1530055	1531104	-	nitrogen regulation protein NR(II)	HK	Classic	Histidine kinase, Classic contains 1 PAS,1 HisKA,1 HATPase_c	0
EAE_07525	1565028	1566401	-	two-component sensor protein	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
EAE_07530	1566398	1567096	-	DNA-binding transcriptional regulator CpxR	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
EAE_08225	1732475	1733860	+	sensor protein ZraS	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	3
EAE_08230	1733847	1735178	+	transcriptional regulator ZraR	RR	NtrC	Response regulator, NtrC family contains 1 Response_reg,1 AAA_5,1 HTH_8	0
EAE_08655	1834374	1835108	+	winged helix family two component                     transcriptional regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
EAE_08675	1838818	1841103	+	integral membrane sensor hybrid histidine                     kinase	HK	Hybrid	Histidine kinase, Hybrid contains 1 HAMP,1 HisKA,1 HATPase_c,1 REC	3
EAE_09990	2124512	2125195	+	DNA-binding transcriptional activator CusR	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
EAE_09995	2125185	2126627	+	sensor kinase CusS	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
EAE_10660	2269274	2269963	+	DNA-binding response regulator CreB	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
EAE_10665	2269963	2271387	+	sensory histidine kinase CreC	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
EAE_10675	2272868	2273584	-	two-component response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
EAE_10910	2326174	2326878	-	putative transcriptional regulator	RR	CitT	Response regulator, CitT family contains 1 Response_reg,1 CitT	0
EAE_10915	2326871	2328499	-	signal transduction histidine kinase regulating                     citrate/malate metabolism	HK	Classic	Histidine kinase, Classic contains 1 HisKA_MA, 1 HATPase_c	3
EAE_11050	2359826	2360524	-	response regulator receiver and unknown                     domain-containing protein	RR	IclR	Response regulator, IclR family contains 1 Response_reg,1 CitT,1 HTH_IclR	0
EAE_11055	2360514	2362139	-	two-component sensor kinase	HK	Classic	Histidine kinase, Classic contains 1 PAS_4, 1 HisKA_MA, 1 HATPase_c, 	3
EAE_12435	2667300	2667989	+	transcriptional regulator PhoB	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
EAE_12440	2668011	2669306	+	phosphate regulon sensor protein	HK	Classic	Histidine kinase, Classic contains 1 PAS,1 HisKA,1 HATPase_c	1
EAE_14065	3025058	3025735	-	winged helix family two component                     transcriptional regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
EAE_14070	3025732	3028419	-	sensor protein KdpD	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	4
EAE_14475	3108631	3109728	-	sensor protein BasS/PmrB	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
EAE_14480	3109733	3110404	-	DNA-binding transcriptional regulator BasR	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
EAE_14905	3197882	3198598	+	winged helix family two component                     transcriptional regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
EAE_14910	3198595	3200067	+	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	3
EAE_15525	3355671	3357629	+	chemotaxis protein CheA	HK	CheA	Histidine kinase, CheA contains 1 Hpt,1 H-kinase_dim,1 HATPase_c,1 CheW	0
EAE_15550	3362561	3363610	+	chemotaxis-specific methylesterase	RR	CheB	Response regulator, CheB family contains 1 Response_reg,1 CheB_methylest	0
EAE_15555	3363682	3364071	+	response regulator receiver protein	RR	CheY	Response regulator, CheY family contains 1 Response_reg	0
EAE_16555	3573326	3574792	-	sensor protein PhoQ	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
EAE_16560	3574789	3575463	-	DNA-binding transcriptional regulator PhoP	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
EAE_16815	3630361	3631011	-	transcriptional regulator NarL	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
EAE_16820	3631022	3632800	-	nitrate/nitrite sensor protein NarX	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA_3,1 HATPase_c	2
EAE_16875	3646369	3647382	+	response regulator of RpoS	RR	unclassified	Response regulator, unclassified contains 1 Response_reg	0
EAE_18070	3896239	3897540	-	sensor protein RstB	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	3
EAE_18080	3898319	3899035	-	DNA-binding transcriptional regulator RstA	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
EAE_18230	3931550	3932269	-	DNA-binding transcriptional activator DcuR	RR	CitT	Response regulator, CitT family contains 1 Response_reg,1 CitT	0
EAE_18235	3932266	3933882	-	sensory histidine kinase DcuS	HK	Classic	Histidine kinase, Classic contains 1 PAS, 1 HisKA_MA, 1 HATPase_c, 	1
EAE_18905	4057377	4057994	-	LuxR family two component transcriptional                     regulator	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 GerE	0
EAE_18910	4057994	4059313	-	two-component sensor kinase-like protein	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	3
EAE_19535	4186621	4187973	-	integral membrane sensor signal transduction                     histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
EAE_19540	4187973	4188710	-	winged helix family two component                     transcriptional regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
EAE_23025	4894787	4895443	-	response regulator	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 GerE	0
EAE_23610	5024409	5025863	+	signal transduction histidine-protein kinase                     BaeS	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	3
EAE_23615	5025860	5026582	+	DNA-binding transcriptional regulator BaeR	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
EAE_23775	5060429	5061148	-	putative two-component response-regulatory                     protein YehT	RR	LytTR	Response regulator, LytTR family contains 1 Response_reg,1 LytTR	0
EAE_23780	5061142	5062830	-	signal transduction histidine kinase LytS	HK	Classic	Histidine kinase, Classic contains 1 GAF,1 His_kinase,1 HATPase_c	7
EAE_24215	5155729	5158389	+	phosphotransfer intermediate protein in                     two-component regulatory system with RcsBC	HK	Classic	Histidine kinase, Classic contains 1 HisKA_MA, 1 HATPase_c, 1 Hpt, 	3
EAE_24220	5158406	5159056	+	transcriptional regulator RcsB	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 GerE	0
EAE_24225	5159169	5162021	-	hybrid sensory kinase in two-component                     regulatory system with RcsB and YojN	HK	Hybrid	Histidine kinase, Hybrid contains 1 HisKA,1 HATPase_c,1 Response_reg	3
EAE_24295	5179307	5180716	-	hypothetical protein	HK	Classic	Histidine kinase, Classic contains 1 2CSK_N,1 HAMP,1 HisKA,1 HATPase_c	2
EAE_24300	5180703	5181380	-	transcriptional regulator TctD	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
