#Enterobacter aerogenes EA1509E (62 genes)
Gene	Start	Stop	Strand	Original description	class	type	P2CS description	tm
ST548_p3107	5314187	5315524	+	Putative sensory histidine kinase YfhA	RR	unclassified	Response regulator, unclassified contains 1 Response_reg,1 AAA_5	0
ST548_p3109	5312036	5313490	+	Putative sensor-like histidine kinase YfhK	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
ST548_p3461	4968485	4971235	-	BarA sensory histidine kinase (	HK	Unorthodox	Histidine kinase, Unorthodox contains 1 HAMP,1 HisKA,1 HATPase_c,1 Response_reg,1 Hpt	2
ST548_p3780	4646457	4647116	-	Two-component system response regulator QseB	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
ST548_p3781	4645111	4646460	-	Sensory histidine kinase QseC	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
ST548_p3964	4465570	4467906	+	Aerobic respiration control sensor protein arcB	HK	Unorthodox	Histidine kinase, Unorthodox contains 1 PAS,1 HisKA,1 HATPase_c,1 Response_reg,1 Hpt	2
ST548_p4108	4331073	4332434	+	Osmolarity sensory histidine kinase EnvZ	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
ST548_p4109	4330357	4331076	+	Two-component system response regulator OmpR	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
ST548_p4425	3988263	3989768	+	Sensor histidine protein kinase UhpB,                     glucose-6-phosphate specific	HK	Classic	Histidine kinase, Classic contains 1 MASE1,1 HisKA_3,1 HATPase_c	7
ST548_p4426	3987673	3988266	+	Transcriptional regulatory protein UhpA	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 GerE	0
ST548_p4522	3885583	3886992	+	Nitrogen regulation protein NR(I)	RR	NtrC	Response regulator, NtrC family contains 1 Response_reg,1 AAA_5,1 HTH_8	0
ST548_p4523	3884525	3885574	+	Nitrogen regulation protein NR(II)	HK	Classic	Histidine kinase, Classic contains 1 PAS,1 HisKA,1 HATPase_c	0
ST548_p4557	3852509	3853882	+	Copper sensory histidine kinase CpxA	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
ST548_p4558	3851814	3852512	+	Copper-sensing two-component system response                     regulator CpxR	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
ST548_p4704	3682943	3684328	-	Sensor protein of zinc sigma-54-dependent                     two-component system	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	3
ST548_p4705	3681625	3682956	-	Response regulator of zinc sigma-54-dependent                     two-component system	RR	NtrC	Response regulator, NtrC family contains 1 Response_reg,1 AAA_5,1 HTH_8	0
ST548_p4802	3581643	3582377	-	putative response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
ST548_p4806	3575648	3577933	-	Putative histidine kinase	HK	Hybrid	Histidine kinase, Hybrid contains 1 HAMP,1 HisKA,1 HATPase_c,1 REC	3
ST548_p5064	3314956	3315639	-	Copper-sensing two-component system response                     regulator CusR	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
ST548_p5065	3313524	3314966	-	Osmosensitive K+ channel histidine kinase KdpD	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
ST548_p5199	3174423	3175112	-	Two-component response regulator CreB	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
ST548_p5200	3172999	3174423	-	Two-component response regulator CreC	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
ST548_p5202	3170802	3171518	+	Aerobic respiration control protein arcA	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
ST548_p5253	3117518	3118222	+	Transcriptional regulatory protein CitB, DpiA	RR	CitT	Response regulator, CitT family contains 1 Response_reg,1 CitT	0
ST548_p5254	3115882	3117525	+	Sensor kinase CitA, DpiB	HK	Classic	Histidine kinase, Classic contains 1 HisKA_MA, 1 HATPase_c	3
ST548_p5282	3084072	3084770	+	Transcriptional regulatory protein CitB, DpiA	RR	IclR	Response regulator, IclR family contains 1 Response_reg,1 CitT,1 HTH_IclR	0
ST548_p5283	3082457	3084082	+	Sensor kinase CitA, DpiB	HK	Classic	Histidine kinase, Classic contains 1 PAS_4, 1 HisKA_MA, 1 HATPase_c, 	2
ST548_p5568	2777811	2778500	-	Phosphate regulon transcriptional regulatory                     protein PhoB (SphR)	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
ST548_p5569	2776494	2777789	-	Phosphate regulon sensor protein PhoR (SphS)	HK	Classic	Histidine kinase, Classic contains 1 PAS,1 HisKA,1 HATPase_c	1
ST548_p5901	2434982	2435659	+	DNA-binding response regulator KdpE	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
ST548_p5902	2432298	2434985	+	Osmosensitive K+ channel histidine kinase KdpD	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	4
ST548_p5985	2350621	2351718	+	Sensor protein basS/pmrB	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
ST548_p5986	2349945	2350616	+	Transcriptional regulatory protein basR/pmrA	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
ST548_p6075	2261363	2262079	-	Putative response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
ST548_p6076	2259894	2261366	-	Osmosensitive K+ channel histidine kinase KdpD	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	3
ST548_p6255	2053447	2055405	-	Signal transduction histidine kinase CheA	HK	CheA	Histidine kinase, CheA contains 1 Hpt,1 H-kinase_dim,1 HATPase_c,1 CheW	0
ST548_p6260	2047466	2048515	-	Chemotaxis response regulator protein-glutamate                     methylesterase CheB	RR	CheB	Response regulator, CheB family contains 1 Response_reg,1 CheB_methylest	0
ST548_p6261	2047005	2047394	-	Chemotaxis regulator-transmits chemoreceptor                     signals to flagelllar motor components CheY	RR	CheY	Response regulator, CheY family contains 1 Response_reg	0
ST548_p6455	1848693	1850150	+	Sensor protein PhoQ	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
ST548_p6456	1848013	1848687	+	Transcriptional regulatory protein PhoP	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
ST548_p6512	1795033	1795683	+	Nitrate/nitrite response regulator protein	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
ST548_p6513	1793244	1795022	+	Nitrate/nitrite sensor protein	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA_3,1 HATPase_c	2
ST548_p6525	1778411	1779424	-	Hnr protein	RR	unclassified	Response regulator, unclassified contains 1 Response_reg	0
ST548_p6778	1523160	1524461	+	Sensory histidine kinase in two-component                     regulatory system with RstA	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	3
ST548_p6780	1521665	1522381	+	Transcriptional regulatory protein RstA	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
ST548_p6813	1488484	1489203	+	Fumarate respiration transcriptional regulator                     DcuR	RR	CitT	Response regulator, CitT family contains 1 Response_reg,1 CitT	0
ST548_p6814	1486871	1488487	+	Fumarate respiration sensor kinase protein DcuS	HK	Classic	Histidine kinase, Classic contains 1 PAS, 1 HisKA_MA, 1 HATPase_c, 	3
ST548_p6958	1356739	1357308	+	hypothetical protein	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
ST548_p7080	1233773	1235125	+	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
ST548_p7081	1233036	1233773	+	putative two-component response regulator                     transcriptional regulatory protein	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
ST548_p7708	604587	605294	+	BarA-associated response regulator UvrY (	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 GerE	0
ST548_p7899	348317	349771	-	Sensory histidine kinase BaeS	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	3
ST548_p7900	347598	348320	-	Response regulator BaeR	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
ST548_p7935	313032	313751	+	Hypothetical response regulatory protein yehT	RR	LytTR	Response regulator, LytTR family contains 1 Response_reg,1 LytTR	0
ST548_p7936	311350	313038	+	Autolysin sensor kinase	HK	Classic	Histidine kinase, Classic contains 1 GAF,1 His_kinase,1 HATPase_c	7
ST548_p8081	177518	179329	-	Two-component sensor protein RcsD	HK	Classic	Histidine kinase, Classic contains 1 HisKA_MA, 1 HATPase_c, 1 Hpt, 	1
ST548_p8082	176851	177501	-	DNA-binding capsular synthesis response                     regulator RcsB	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 GerE	0
ST548_p8084	173886	176738	+	Two-component sensor protein RcsC	HK	Hybrid	Histidine kinase, Hybrid contains 1 HisKA,1 HATPase_c,1 Response_reg	3
ST548_p8099	155190	156599	+	Tricarboxylate transport sensor protein TctE	HK	Classic	Histidine kinase, Classic contains 1 2CSK_N,1 HAMP,1 HisKA,1 HATPase_c	2
ST548_p8100	154526	155203	+	Tricarboxylate transport transcriptional                     regulator TctD	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
ST548_p8187	67875	69572	-	putative sensor protein	HK	Classic	Histidine kinase, Classic contains 1 GAF,1 His_kinase,1 HATPase_c	5
ST548_p8188	67120	67863	-	Hypothetical response regulatory protein ypdB	RR	LytTR	Response regulator, LytTR family contains 1 Response_reg,1 LytTR	0
