#Clostridium perfringens ATCC 13124 (55 genes)
Gene	Start	Stop	Strand	Original description	class	type	P2CS description	tm
CPF_0115	135917	136597	+	DNA-binding response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
CPF_0116	136594	137607	+	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	1
CPF_0198	240450	242825	-	sensory box histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 PAS,1 HisKA,1 HATPase_c	9
CPF_0225	274798	276228	-	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	3
CPF_0226	276218	276889	-	DNA-binding response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
CPF_0459	544990	545694	+	DNA-binding response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
CPF_0460	545669	547900	+	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	5
CPF_0498	593925	594641	+	DNA-binding response regulator	RR	LytTR	Response regulator, LytTR family contains 1 Response_reg,1 LytTR	0
CPF_0499	594646	595941	+	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA_MA, 1 HATPase_c	6
CPF_0511	610004	611554	+	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA_MA, 1 HATPase_c	3
CPF_0512	611554	612222	+	two-component response regulator	RR	unclassified	Response regulator, unclassified contains 1 Response_reg,1 HTH_11	0
CPF_0554	660619	662370	+	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 His_kinase,1 HATPase_c	3
CPF_0555	662383	663972	+	AraC family transcriptional regulator	RR	YesN	Response regulator, YesN family contains 1 Response_reg,2 HTH_AraC	0
CPF_0623	750608	751303	+	DNA-binding response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
CPF_0836	990160	990828	+	DNA-binding response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
CPF_0837	990825	991835	+	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	2
CPF_0863	1027653	1028915	-	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA_MA, 1 HATPase_c	8
CPF_0888	1053227	1053802	+	response regulator	RR	AmiR_NasR	Response regulator, AmiR_NasR family contains 1 Response_reg,1 ANTAR	0
CPF_0889	1053806	1055233	+	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA_2,1 HATPase_c	0
CPF_1056	1204584	1205264	+	DNA-binding response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
CPF_1057	1205257	1206513	+	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	3
CPF_1111	1267397	1268917	+	AraC family transcriptional regulator	RR	YesN	Response regulator, YesN family contains 1 Response_reg,2 HTH_AraC	0
CPF_1112	1268935	1270659	+	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 His_kinase,1 HATPase_c	3
CPF_1139	1300967	1301650	+	DNA-binding response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
CPF_1140	1301654	1302910	+	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	2
CPF_1171	1336302	1337534	+	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 His_kinase,1 HATPase_c	0
CPF_1172	1337554	1338306	+	AraC family transcriptional regulator	RR	YesN	Response regulator, YesN family contains 1 Response_reg,2 HTH_AraC	0
CPF_1192	1357715	1358404	+	DNA-binding response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
CPF_1195	1360293	1361198	+	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	1
CPF_1213	1376625	1379327	+	sensor histidine kinase KdpD	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	7
CPF_1214	1379302	1380015	+	DNA-binding response regulator KdpE	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
CPF_1243	1415500	1417371	+	sensory box histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 PAS_4,1 PAS_3,1 HisKA,1 HATPase_c	0
CPF_1402	1575064	1576500	-	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	3
CPF_1403	1576487	1577164	-	DNA-binding response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
CPF_1497	1704972	1707809	-	ATPase	HK	Classic	Histidine kinase, Classic contains 1 HisKA_MA, 1 HATPase_c	0
CPF_1523	1739951	1742314	-	sensory box histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	9
CPF_1751	1969661	1970983	-	sensor histidine kinase VirS	HK	Classic	Histidine kinase, Classic contains 1 HisKA_MA, 1 HATPase_c	6
CPF_1752	1970977	1971687	-	LytTr family DNA-binding response regulator	RR	LytTR	Response regulator, LytTR family contains 1 Response_reg,1 LytTR	0
CPF_1764	1986215	1989496	-	sensor histidine kinase/response regulator	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	1
CPF_2010	2251410	2253125	-	sensory box histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 PAS_4,1 HisKA,1 HATPase_c	1
CPF_2067	2305983	2306813	-	Spo0A protein	RR	Spo0A	Response regulator, Spo0A family contains 1 Response_reg,1 Spo0A_C	0
CPF_2180	2419541	2420212	+	DNA-binding response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
CPF_2181	2420212	2421735	+	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	3
CPF_2241	2487630	2489666	-	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	7
CPF_2242	2489656	2491518	-	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	9
CPF_2344	2607576	2609099	-	AraC family transcriptional regulator	RR	YesN	Response regulator, YesN family contains 1 Response_reg,2 HTH_AraC	0
CPF_2345	2609104	2610840	-	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 His_kinase,1 HATPase_c	1
CPF_2355	2620546	2621994	-	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	3
CPF_2356	2621984	2622682	-	DNA-binding response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
CPF_2503	2775782	2777197	-	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	3
CPF_2504	2777378	2778061	-	DNA-binding response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
CPF_2640	2906353	2907285	-	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	3
CPF_2673	2947900	2949651	-	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	5
CPF_2674	2949704	2950402	-	DNA-binding response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
CPF_2811	3071824	3072510	-	DNA-binding response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
