#Citrobacter koseri ATCC BAA-895 (71 genes)
Gene	Start	Stop	Strand	Original description	class	type	P2CS description	tm
CKO_00007	6619	8121	-	sensory histidine kinase UhpB	HK	Classic	Histidine kinase, Classic contains 1 MASE1,1 HisKA_3,1 HATPase_c	7
CKO_00008	8121	8792	-	DNA-binding transcriptional activator UhpA	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 GerE	0
CKO_00231	222499	223980	+	hypothetical protein	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
CKO_00233	224744	226081	+	hypothetical protein	RR	unclassified	Response regulator, unclassified contains 1 Response_reg,1 AAA_5	0
CKO_00321	313173	314873	-	nitrate/nitrite sensor protein NarQ	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA_3,1 HATPase_c	2
CKO_00419	396279	397013	-	hypothetical protein	RR	LytTR	Response regulator, LytTR family contains 1 Response_reg,1 LytTR	0
CKO_00420	397028	398707	-	hypothetical protein	HK	Classic	Histidine kinase, Classic contains 1 His_kinase,1 HATPase_c	5
CKO_00521	500060	501064	-	hypothetical protein	RR	CheV	Response regulator, CheV family contains 1 CheW,1 Response_reg	0
CKO_00549	532576	533961	-	acetoacetate metabolism regulatory protein AtoC	RR	NtrC	Response regulator, NtrC family contains 1 Response_reg,1 AAA,1 HTH_8	0
CKO_00550	533958	535739	-	sensory histidine kinase AtoS	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 PAS,1 HisKA,1 HATPase_c	4
CKO_00552	535953	538799	+	hybrid sensory kinase in two-component                     regulatory system with RcsB and YojN	HK	Hybrid	Histidine kinase, Hybrid contains 1 HisKA,1 HATPase_c,1 Response_reg	3
CKO_00553	538893	539543	-	transcriptional regulator RcsB	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 GerE	0
CKO_00554	539560	542229	-	phosphotransfer intermediate protein in                     two-component regulatory system with RcsBC	HK	Classic	Histidine kinase, Classic contains 1 HisKA_MA, 1 HATPase_c, 1 Hpt, 	1
CKO_00584	565627	566274	-	transcriptional regulator NarP	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 GerE	0
CKO_00668	642881	644566	+	hypothetical protein	HK	Classic	Histidine kinase, Classic contains 1 GAF,1 His_kinase,1 HATPase_c	7
CKO_00669	644563	645282	+	putative two-component response-regulatory                     protein YehT	RR	LytTR	Response regulator, LytTR family contains 1 Response_reg,1 LytTR	0
CKO_00702	676056	676778	-	DNA-binding transcriptional regulator BaeR	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
CKO_00703	676775	678178	-	signal transduction histidine-protein kinase                     BaeS	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
CKO_01031	1019940	1020593	+	response regulator	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 GerE	0
CKO_01061	1040389	1042416	+	chemotaxis protein CheA	HK	CheA	Histidine kinase, CheA contains 1 Hpt,1 H-kinase_dim,1 HATPase_c,1 CheW	0
CKO_01069	1048958	1050007	+	chemotaxis-specific methylesterase	RR	CheB	Response regulator, CheB family contains 1 Response_reg,1 CheB_methylest	0
CKO_01070	1050024	1050413	+	chemotaxis regulatory protein CheY	RR	CheY	Response regulator, CheY family contains 1 Response_reg	0
CKO_01204	1162722	1163579	-	molybdenum transport protein ModD	RR	unclassified	Response regulator, unclassified contains 1 Response_reg	0
CKO_01296	1266148	1266798	-	transcriptional regulator NarL	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
CKO_01297	1266791	1268587	-	nitrate/nitrite sensor protein NarX	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA_3,1 HATPase_c	2
CKO_01313	1280804	1281817	+	response regulator of RpoS	RR	unclassified	Response regulator, unclassified contains 1 Response_reg	0
CKO_01618	1560611	1561354	+	DNA-binding transcriptional regulator RstA	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
CKO_01619	1561367	1562668	+	sensor protein RstB	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	3
CKO_01922	1796823	1797497	+	DNA-binding transcriptional regulator PhoP	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
CKO_01923	1797497	1798960	+	sensor protein PhoQ	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
CKO_02089	1930869	1932116	-	hypothetical protein	RR	PrrA	Response regulator, PrrA family contains 1 Response_reg,1 HTH_8	0
CKO_02090	1932106	1934115	-	hypothetical protein	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	3
CKO_02245	2081865	2083334	-	hypothetical protein	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	2
CKO_02246	2083318	2084025	-	hypothetical protein	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
CKO_02466	2281940	2284627	+	sensor protein KdpD	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	4
CKO_02467	2284624	2285301	+	DNA-binding transcriptional activator KdpE	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
CKO_02539	2342241	2342918	-	two-component response regulator DpiA	RR	CitT	Response regulator, CitT family contains 1 Response_reg,1 CitT	0
CKO_02540	2342887	2344548	-	hypothetical protein	HK	Classic	Histidine kinase, Classic contains 1 HisKA_MA, 1 HATPase_c	2
CKO_02615	2421729	2422427	+	DNA-binding transcriptional activator CusR	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
CKO_02616	2422417	2423868	+	sensor kinase CusS	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	3
CKO_02622	2427102	2427734	+	transcriptional regulator FimZ	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 GerE	0
CKO_02771	2569643	2570938	-	phosphate regulon sensor protein	HK	Classic	Histidine kinase, Classic contains 1 PAS,1 HisKA,1 HATPase_c	1
CKO_02772	2571006	2571695	-	transcriptional regulator PhoB	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
CKO_02815	2608129	2608758	+	hypothetical protein	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 GerE	0
CKO_02817	2608758	2610299	+	hypothetical protein	HK	Classic	Histidine kinase, Classic contains 1 MASE1,1 HisKA_3,1 HATPase_c	8
CKO_02942	2724794	2725126	-	hypothetical protein	PP	HPt	Phosphotransfer protein contains 1 Hpt	0
CKO_03088	2861800	2862498	+	DNA-binding transcriptional regulator CpxR	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
CKO_03089	2862495	2863868	+	two-component sensor protein	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
CKO_03143	2912366	2913415	+	nitrogen regulation protein NR(II)	HK	Classic	Histidine kinase, Classic contains 1 PAS,1 HisKA,1 HATPase_c	0
CKO_03144	2913427	2914836	+	nitrogen regulation protein NR(I)	RR	NtrC	Response regulator, NtrC family contains 1 Response_reg,1 AAA_5,1 HTH_8	0
CKO_03361	3130645	3132282	+	hypothetical protein	HK	Classic	Histidine kinase, Classic contains 1 PAS, 1 HisKA_MA, 1 HATPase_c, 	2
CKO_03362	3132272	3132964	+	hypothetical protein	RR	IclR	Response regulator, IclR family contains 1 Response_reg,1 CitT,1 HTH_IclR	0
CKO_03387	3158660	3159376	+	two-component response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
CKO_03745	3484719	3486308	+	sensory histidine kinase DcuS	HK	Classic	Histidine kinase, Classic contains 1 PAS, 1 HisKA_MA, 1 HATPase_c, 	2
CKO_03746	3486305	3487024	+	DNA-binding transcriptional activator DcuR	RR	CitT	Response regulator, CitT family contains 1 Response_reg,1 CitT	0
CKO_03752	3492534	3493202	+	DNA-binding transcriptional regulator BasR	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
CKO_03753	3493233	3494288	+	sensor protein BasS/PmrB	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
CKO_03790	3521642	3523924	-	hypothetical protein	HK	Hybrid	Histidine kinase, Hybrid contains 1 HAMP,1 HisKA,1 HATPase_c,1 Response_reg	3
CKO_03799	3530343	3531074	-	hypothetical protein	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
CKO_03846	3575661	3577493	+	hypothetical protein	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	2
CKO_03847	3577483	3578826	+	hypothetical protein	RR	NtrC	Response regulator, NtrC family contains 1 Response_reg,1 AAA_5,1 HTH_8	0
CKO_03999	3723126	3724538	-	hypothetical protein	HK	Classic	Histidine kinase, Classic contains 1 2CSK_N,1 HAMP,1 HisKA,1 HATPase_c	2
CKO_04000	3724525	3725199	-	hypothetical protein	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
CKO_04139	3848737	3851493	+	hybrid sensory histidine kinase BarA	HK	Unorthodox	Histidine kinase, Unorthodox contains 1 HAMP,1 HisKA,1 HATPase_c,1 Response_reg,1 Hpt	2
CKO_04367	4038520	4039164	+	DNA-binding transcriptional activator EvgA	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
CKO_04368	4039164	4042346	+	hypothetical protein	HK	Unorthodox	Histidine kinase, Unorthodox contains 1 PBPb,1 SBP_bac_3,1 HisKA,1 HATPase_c,1 Response_reg,1 Hpt	1
CKO_04414	4087040	4087699	+	DNA-binding transcriptional regulator QseB	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
CKO_04415	4087696	4089045	+	sensor protein QseC	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
CKO_04614	4254054	4256390	-	aerobic respiration control sensor protein ArcB	HK	Unorthodox	Histidine kinase, Unorthodox contains 1 PAS,1 HisKA,1 HATPase_c,1 Response_reg,1 Hpt	2
CKO_04826	4425409	4426761	-	osmolarity sensor protein	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
CKO_04827	4426758	4427630	-	osmolarity response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
