#Bacillus sp. JS (74 genes)
Gene	Start	Stop	Strand	Original description	class	type	P2CS description	tm
MY9_0199	219248	219919	+	protein YbdJ	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
MY9_0200	219916	220902	+	sensor histidine kinase YbdK	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
MY9_0245	259921	261306	+	two-component sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA_MA, 1 HATPase_c	5
MY9_0246	261317	262261	+	two-component response regulator GlnJ	RR	YcbB	Response regulator, YcbB family contains 1 Response_reg,1 YcbB	0
MY9_0257	272968	273660	+	sensory transduction protein YcbL	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
MY9_0258	273662	274597	+	two-component sensor histidine kinase YcbL	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	0
MY9_0278	289159	290115	-	two-component sensor histidine kinase NatR	HK	Classic	Histidine kinase, Classic contains 1 HisKA_MA, 1 HATPase_c	3
MY9_0279	290128	290829	-	two-component response regulator NatK	RR	LytTR	Response regulator, LytTR family contains 1 Response_reg,1 LytTR	0
MY9_0391	422013	422906	+	hypothetical protein	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
MY9_0392	422896	424314	+	two-component sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	1
MY9_0466	493295	494902	+	C4-dicarboxylate histidine kinase DctS	HK	Classic	Histidine kinase, Classic contains 1 HisKA_MA, 1 HATPase_c	3
MY9_0467	494892	495572	+	two-component response regulator	RR	unclassified	Response regulator, unclassified contains 1 Response_reg,1 HTH_11	0
MY9_0583	594996	596444	-	Histidine kinase-, DNA gyrase B-, and HSP90-like                     ATPase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	3
MY9_0584	596457	597218	-	two-component response regulator YclJ	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
MY9_0593	602575	603738	+	histidine kinase YdfH	HK	Classic	Histidine kinase, Classic contains 1 MASE1,1 HisKA_3,1 HATPase_c	7
MY9_0594	603731	604372	+	two-component response regulator YdfH	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
MY9_0787	824989	826722	+	YesM	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 His_kinase,1 HATPase_c	3
MY9_0788	826722	827828	+	two-component response regulator YesM	RR	YesN	Response regulator, YesN family contains 1 Response_reg,2 HTH_AraC	0
MY9_0848	890769	892397	+	two-component sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 PAS, 1 HisKA_MA, 1 HATPase_c, 	2
MY9_0849	892369	893049	+	two-component response regulator	RR	CitT	Response regulator, CitT family contains 1 Response_reg,1 CitT,1 HTH_11	0
MY9_0916	957041	958249	+	two-component sensor histidine kinase YfiK	HK	Classic	Histidine kinase, Classic contains 1 HisKA_3,1 HATPase_c	5
MY9_0917	958246	958908	+	two-component response regulator YfiJ	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
MY9_1028	1062978	1064117	+	Histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 GAF,1 HisKA_3,1 HATPase_c	0
MY9_1029	1064114	1064761	+	two-component response regulator YhcY	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
MY9_1454	1441491	1442177	+	two-component response regulator YkoH	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
MY9_1455	1442181	1443542	+	two-component sensor histidine kinase YkoG	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
MY9_1481	1468760	1470976	+	sporulation sensor histidine kinase E	HK	Classic	Histidine kinase, Classic contains 4 PAS_4,1 HisKA,1 HATPase_c	0
MY9_1495	1481034	1482536	-	histidine kinase phosphorylating Spo0A	HK	Classic	Histidine kinase, Classic contains 1 Cache_1,1 HisKA,1 HATPase_c	3
MY9_1535	1519855	1521675	+	two-component sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 PAS_3,2 PAS,1 HisKA,1 HATPase_c	0
MY9_1538	1523435	1524346	+	coupling protein and response regulator for CheA                     activity in response to attractants (chemotaxis)	RR	CheV	Response regulator, CheV family contains 1 CheW,1 Response_reg	0
MY9_1586	1564815	1566101	+	two-component sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 PAS,1 HisKA,1 HATPase_c	3
MY9_1781	1750468	1750830	+	regulator of chemotaxis and motility	RR	CheY	Response regulator, CheY family contains 1 Response_reg	0
MY9_1790	1758367	1759434	+	chemotaxis-specific methylesterase	RR	CheB	Response regulator, CheB family contains 1 Response_reg,1 CheB_methylest	0
MY9_1791	1759440	1761455	+	sensor histidine kinase CheA	HK	CheA	Histidine kinase, CheA contains 1 Hpt,1 H-kinase_dim,1 HATPase_c,1 CheW	0
MY9_1959	1976177	1976539	+	Response regulator receiver domain-containing                     protein	RR	CheY	Response regulator, CheY family contains 1 Response_reg	0
MY9_2099	2132846	2133958	+	Histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA_3,1 HATPase_c	5
MY9_2100	2133977	2134576	+	two-component response regulator DesK	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
MY9_2323	2321422	2323191	-	ResE	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 PAS,1 HisKA,1 HATPase_c	3
MY9_2324	2323188	2323943	-	two-component response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
MY9_2443	2424574	2425377	-	sporulation transcriptional regulator Spo0A	RR	Spo0A	Response regulator, Spo0A family contains 1 Response_reg,1 Spo0A_C	0
MY9_2883	2820130	2820855	-	two-component response regulator LytS	RR	LytTR	Response regulator, LytTR family contains 1 Response_reg,1 LytTR	0
MY9_2884	2820833	2822614	-	sensor histidine kinase LytS	HK	Classic	Histidine kinase, Classic contains 1 GAF,1 His_kinase,1 HATPase_c	5
MY9_2901	2840396	2842135	-	two-component sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 PAS,1 HisKA,1 HATPase_c	2
MY9_2902	2842128	2842850	-	alkaline phosphatase synthesis transcriptional                     regulatory protein PhoP	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
MY9_3041	2976865	2977869	-	sensor protein BceS	HK	Classic	Histidine kinase, Classic contains 1 HisKA_MA, 1 HATPase_c	1
MY9_3042	2977862	2978611	-	two-component response regulator controlling                     resistance to antibiotics affecting the envelope YtsB	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
MY9_3156	3094810	3096096	+	two-component sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	7
MY9_3164	3101914	3103515	+	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 PAS, 1 HisKA_MA, 1 HATPase_c, 	2
MY9_3165	3103508	3104215	+	two-component response regulator YufL	RR	unclassified	Response regulator, unclassified contains 1 Response_reg	0
MY9_3180	3117558	3118202	-	two-component response regulator	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 GerE	0
MY9_3181	3118283	3120583	-	two-component sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 MASE1,1 HisKA_3,1 HATPase_c	9
MY9_3339	3263690	3264367	+	two-component response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
MY9_3340	3264364	3265719	+	two-component sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	3
MY9_3348	3272393	3273028	-	LiaR protein	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
MY9_3349	3273006	3274088	-	sensor protein LiaS	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA_3,1 HATPase_c	2
MY9_3363	3284585	3286327	-	YvrG	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	3
MY9_3364	3286324	3287070	-	YvrH	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
MY9_3451	3370512	3371114	-	two-component response regulator YvfT	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
MY9_3452	3371131	3372246	-	YvfT	HK	Classic	Histidine kinase, Classic contains 1 HisKA_3,1 HATPase_c	5
MY9_3513	3437934	3439004	-	two-component sensor histidine kinase YvcP	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	2
MY9_3514	3438998	3439711	-	two-component response regulator YvcQ	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
MY9_3598	3516493	3517182	-	DegU protein	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
MY9_3599	3517265	3518422	-	protein DegS	HK	Classic	Histidine kinase, Classic contains 1 HisKA_3,1 HATPase_c	0
MY9_3702	3629503	3630579	-	hypothetical protein	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
MY9_3703	3630767	3633844	+	Histidine kinase-, DNA gyrase B-, and HSP90-like                     ATPase	HK	Hybrid	Histidine kinase, Hybrid contains 1 HisKA,2 HATPase_c,1 Response_reg,1 His_kinase	7
MY9_3796	3706696	3707070	-	two-component response regulator	RR	CheY	Response regulator, CheY family contains 1 Response_reg	0
MY9_4005	3894637	3895857	+	hypothetical protein	HK	Classic	Histidine kinase, Classic contains 1 HisKA_3,1 HATPase_c	6
MY9_4006	3895844	3896500	+	two-component response regulator YxjM	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
MY9_4096	3976425	3977402	-	two-component sensor histidine kinase YxdJ	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	1
MY9_4097	3977399	3978088	-	two-component response regulator YxdK	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
MY9_4171	4054391	4055857	-	heavy metal sensor kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
MY9_4172	4055854	4056537	-	response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
MY9_4179	4062741	4064576	-	two-component sensor histidine kinase WalK	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 PAC,1 HisKA,1 HATPase_c	1
MY9_4180	4064584	4065294	-	two-component response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
