#Bacillus cereus FRI-35 (96 genes)
Gene	Start	Stop	Strand	Original description	class	type	P2CS description	tm
BCK_00145	24005	24913	-	chemotaxis protein CheV	RR	CheV	Response regulator, CheV family contains 1 CheW,1 Response_reg	0
BCK_00275	46691	48703	-	chemotaxis histidine kinase	HK	CheA	Histidine kinase, CheA contains 1 Hpt,1 H-kinase_dim,1 HATPase_c,1 CheW	0
BCK_00280	48832	49200	-	chemotaxis protein	RR	CheY	Response regulator, CheY family contains 1 Response_reg	0
BCK_00990	169807	171582	-	sensor histidine kinase ResE	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 PAS,1 HisKA,1 HATPase_c	3
BCK_00995	171582	172298	-	DNA-binding response regulator ResD	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
BCK_01065	186033	187844	+	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	3
BCK_01090	190096	191367	+	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 PAS_4,1 HisKA,1 HATPase_c	0
BCK_01180	207504	208136	-	Response regulator	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
BCK_01185	208133	209188	-	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA_3,1 HATPase_c	2
BCK_01685	289631	290839	+	sporulation kinase B	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	5
BCK_01710	294232	295728	+	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	1
BCK_01885	326585	327985	-	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
BCK_01890	327989	328660	-	DNA-binding response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
BCK_02790	500462	501166	+	DNA-binding response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
BCK_02795	501176	502918	+	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	3
BCK_03260	593409	596099	+	sensor histidine kinase	HK	Hybrid	Histidine kinase, Hybrid contains 1 CHASE3,1 HAMP,1 GAF,1 HisKA,1 HATPase_c,1 Response_reg	1
BCK_03270	597012	598154	-	response regulator	RR	RsbU	Response regulator, RsbU family contains 1 Response_reg,1 SpoIIE	0
BCK_03645	662343	663020	-	two-component response regulator	RR	unclassified	Response regulator, unclassified contains 1 Response_reg,1 HTH_11	0
BCK_03650	663040	664629	-	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 PAS, 1 HisKA_MA, 1 HATPase_c, 	3
BCK_04900	922108	922785	+	DNA-binding response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
BCK_04905	922797	924188	+	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	3
BCK_05215	994643	995314	+	DNA-binding response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
BCK_05220	995380	996825	+	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	3
BCK_05255	1003776	1004483	-	response regulator	RR	unclassified	Response regulator, unclassified contains 1 Response_reg,1 HTH_11	0
BCK_05260	1004480	1006084	-	sensory histidine kinase DcuS	HK	Classic	Histidine kinase, Classic contains 1 PAS, 1 HisKA_MA, 1 HATPase_c, 	3
BCK_05280	1010167	1011417	-	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	2
BCK_05285	1011414	1012085	-	Response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
BCK_05345	1023092	1023784	-	DNA-binding response regulator	RR	unclassified	Response regulator, unclassified contains 1 Response_reg,1 HTH_11	0
BCK_05350	1023784	1025394	-	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 PAS, 1 HisKA_MA, 1 HATPase_c, 	3
BCK_06235	1218984	1221002	-	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 GAF,1 PAS_4,1 HisKA,1 HATPase_c	0
BCK_06535	1305592	1307097	-	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
BCK_06540	1307081	1307782	-	DNA-binding response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
BCK_07960	1601866	1602570	+	DNA-binding response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
BCK_07965	1602574	1604415	+	sensory box histidine kinase YycG	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
BCK_08145	1643252	1645021	+	sensor histidine kinase LytS	HK	Classic	Histidine kinase, Classic contains 1 GAF,1 His_kinase,1 HATPase_c	6
BCK_08150	1644999	1645739	+	response regulator LytR	RR	LytTR	Response regulator, LytTR family contains 1 Response_reg,1 LytTR	0
BCK_08270	1672616	1673332	+	response regulator	RR	LytTR	Response regulator, LytTR family contains 1 Response_reg,1 LytTR	0
BCK_08295	1677970	1679541	+	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 GAF,1 HisKA_3,1 HATPase_c	1
BCK_08300	1679562	1680209	+	DNA-binding response regulator	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
BCK_08590	1740710	1741840	+	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA_3,1 HATPase_c	6
BCK_08595	1741837	1742439	+	DNA-binding response regulator	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
BCK_08670	1760217	1760585	+	Sporulation initiation phosphotransferase F	RR	CheY	Response regulator, CheY family contains 1 Response_reg	0
BCK_09075	1837308	1837979	+	DNA-binding response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
BCK_09080	1837991	1839421	+	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	3
BCK_09785	1985306	1986010	+	response regulator protein	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
BCK_09790	1985994	1987502	+	sensory transduction protein	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
BCK_09825	1993031	1993708	+	two-component response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
BCK_10090	2046186	2047628	-	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	1
BCK_10095	2047606	2048271	-	two-component response regulator VanRB	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
BCK_10885	2197845	2198543	+	DNA-binding response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
BCK_10890	2198536	2199642	+	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
BCK_10975	2217198	2218220	-	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	2
BCK_10980	2218223	2218918	-	DNA-binding response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
BCK_11070	2232898	2233587	+	DNA-binding response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
BCK_11075	2233584	2235434	+	sensory box histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	1
BCK_11270	2264385	2265638	+	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	5
BCK_11275	2265635	2266855	+	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA_MA, 1 HATPase_c	5
BCK_12275	2446916	2447635	+	DNA-binding response regulator PhoP	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
BCK_12280	2447628	2449391	+	phosphate regulon sensor protein	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 PAS,1 HisKA,1 HATPase_c	2
BCK_12555	2501073	2501765	+	DNA-binding response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
BCK_12560	2501767	2502702	+	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	0
BCK_12995	2582715	2583422	+	DNA-binding response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
BCK_13000	2583412	2584494	+	two-component sensor kinase yvcQ	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	2
BCK_14325	2823792	2824586	+	stage 0 sporulation protein A	RR	Spo0A	Response regulator, Spo0A family contains 1 Response_reg,1 Spo0A_C	0
BCK_15180	2975356	2976630	+	sporulation kinase B	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	7
BCK_17000	3351331	3352863	-	sporulation kinase A	HK	Classic	Histidine kinase, Classic contains 1 PAS,1 PAS_4,1 HisKA,1 HATPase_c	0
BCK_17245	3391726	3392403	+	transcriptional regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
BCK_18845	3695753	3696430	+	DNA-binding response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
BCK_18850	3696432	3697808	+	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
BCK_19870	3895197	3895931	+	response regulator	RR	LytTR	Response regulator, LytTR family contains 1 Response_reg,1 LytTR	0
BCK_19875	3895931	3897247	+	histidine kinase domain-containing protein	HK	Classic	Histidine kinase, Classic contains 1 HisKA_MA, 1 HATPase_c	6
BCK_20560	4023396	4024043	+	response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
BCK_20565	4024036	4025412	+	sensor histidine kinase SrrB	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	3
BCK_21605	4202999	4204414	-	two-component sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	3
BCK_21610	4204411	4205085	-	DNA-binding response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
BCK_21630	4207351	4208619	+	sporulation kinase B	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	7
BCK_21670	4217009	4218796	-	hypothetical protein	HK	Classic	Histidine kinase, Classic contains 1 PAS,1 PAS_4,1 HisKA,1 HATPase_c	0
BCK_21850	4251364	4252347	-	sensor protein YxdK	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	2
BCK_21855	4252344	4253051	-	response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
BCK_22050	4294972	4295667	+	DNA-binding response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
BCK_22055	4295657	4296814	+	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
BCK_22395	4370423	4371064	-	transcriptional regulator	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
BCK_22400	4371066	4372979	-	sensor histidine kinase domain-containing                     protein	HK	Classic	Histidine kinase, Classic contains 1 HisKA_3,1 HATPase_c	6
BCK_23385	4568062	4569180	-	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	0
BCK_23515	4600251	4600886	-	LuxR family transcriptional regulator	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
BCK_23520	4600901	4602019	-	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 GAF,1 HisKA_3,1 HATPase_c	0
BCK_24755	4834827	4835900	-	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
BCK_24760	4835897	4836574	-	DNA-binding response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
BCK_25080	4902445	4903440	-	hypothetical protein	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	3
BCK_25085	4903437	4904129	-	two-component response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
BCK_25230	4934991	4936058	-	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	1
BCK_25235	4936048	4936746	-	DNA-binding response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
BCK_25610	5015678	5016610	-	response regulator	RR	YcbB	Response regulator, YcbB family contains 1 Response_reg,1 YcbB	0
BCK_25615	5016613	5017902	-	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA_MA, 1 HATPase_c	5
BCK_25665	5029342	5030442	-	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA_3,1 HATPase_c	3
BCK_25670	5030447	5031085	-	LuxR family transcriptional regulator	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
