#Bacillus cereus ATCC 14579 (99 genes)
Gene	Start	Stop	Strand	Original description	class	type	P2CS description	tm
BC0298	263260	263961	+	two-component response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
BC0299	263945	265450	+	two component system histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
BC0393	372295	373521	+	sporulation kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	5
BC0560	543169	544776	+	two component system histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 PAS, 1 HisKA_MA, 1 HATPase_c, 	3
BC0561	544779	545471	+	two-component response regulator	RR	unclassified	Response regulator, unclassified contains 1 Response_reg,1 HTH_11	0
BC0572	555714	556412	+	two-component response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
BC0573	556409	557659	+	two component system histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	2
BC0577	561818	563422	+	sensory histidine kinase DcuS	HK	Classic	Histidine kinase, Classic contains 1 PAS, 1 HisKA_MA, 1 HATPase_c, 	3
BC0578	563419	564126	+	two-component response regulator yufM	RR	unclassified	Response regulator, unclassified contains 1 Response_reg,1 HTH_11	0
BC0585	570997	572451	-	two component system histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
BC0586	572517	573188	-	two-component response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
BC0651	645773	647164	-	two component system histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	3
BC0652	647176	647853	-	two-component response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
BC0881	859008	861311	+	sensor protein comP	HK	Classic	Histidine kinase, Classic contains 1 HisKA_3,1 HATPase_c	9
BC0882	861347	862003	+	two-component response regulator comA	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
BC0936	917779	919395	+	two-component sensor kinase citS	HK	Classic	Histidine kinase, Classic contains 1 PAS, 1 HisKA_MA, 1 HATPase_c, 	3
BC0937	919389	920066	+	two-component response regulator citT	RR	unclassified	Response regulator, unclassified contains 1 Response_reg,1 HTH_11	0
BC1006	985909	987051	+	sigma factor sigB regulation protein rsbU	RR	RsbU	Response regulator, RsbU family contains 1 Response_reg,1 SpoIIE	0
BC1008	987965	990655	-	two component system histidine kinase	HK	Hybrid	Histidine kinase, Hybrid contains 1 CHASE3,1 HAMP,1 GAF,1 HisKA,1 HATPase_c,1 Response_reg	1
BC1118	1098897	1100639	-	two-component sensor kinase yvrG	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	3
BC1119	1100649	1101353	-	two-component response regulator yvrH	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
BC1300	1279542	1280213	+	two-component response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
BC1301	1280217	1281617	+	two component system histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
BC1336	1312655	1314151	-	sporulation kinase D	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	1
BC1340	1317544	1318608	-	sporulation kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	5
BC1438	1398412	1399467	+	two-component sensor protein yvqE	HK	Classic	Histidine kinase, Classic contains 1 HisKA_3,1 HATPase_c	2
BC1439	1399464	1400096	+	two-component response regulator yvqC	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
BC1458	1415515	1416786	-	sporulation kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	0
BC1477	1434573	1435289	+	transcriptional regulatory protein resD	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
BC1478	1435289	1437064	+	sensor protein resE	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 PAS,1 HisKA,1 HATPase_c	3
BC1627	1583371	1583739	+	chemotaxis protein CheY	RR	CheY	Response regulator, CheY family contains 1 Response_reg	0
BC1628	1583869	1585887	+	chemotaxis protein CheA	HK	CheA	Histidine kinase, CheA contains 1 Hpt,1 H-kinase_dim,1 HATPase_c,1 CheW	0
BC1654	1607426	1608334	+	chemotaxis protein CheV	RR	CheV	Response regulator, CheV family contains 1 CheW,1 Response_reg	0
BC1732	1676964	1677602	+	two-component response regulator	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
BC1733	1677607	1678707	+	sensory transduction protein kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA_3,1 HATPase_c	3
BC1742	1689173	1690462	+	two component system histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA_MA, 1 HATPase_c	7
BC1743	1690465	1691397	+	two-component response regulator	RR	YcbB	Response regulator, YcbB family contains 1 Response_reg,1 YcbB	0
BC1800	1753855	1754598	+	two-component response regulator vanR	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
BC1801	1754601	1755677	+	sensor protein vanS	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	3
BC1956	1904207	1904884	+	two-component response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
BC1957	1904908	1905954	+	two component system histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
BC1972	1920466	1921155	+	alkaline phosphatase synthesis transcriptional                     regulatory protein PhoP	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
BC1973	1921179	1922510	+	two component system histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
BC2216	2160183	2161307	+	two-component sensor protein yhcY	HK	Classic	Histidine kinase, Classic contains 1 GAF,1 HisKA_3,1 HATPase_c	0
BC2217	2161322	2161963	+	two-component response regulator yhcZ	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
BC2497	2466912	2468069	-	sensor protein vanS	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	2
BC2498	2468059	2468754	-	two-component response regulator vanR	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
BC2538	2511158	2511865	+	two-component response regulator yxdJ	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
BC2539	2511862	2512845	+	two-component sensor kinase yxdK	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	2
BC2619	2581390	2582613	+	sporulation kinase	HK	Classic	Histidine kinase, Classic contains 1 PAS_4,1 HisKA,1 HATPase_c	0
BC2863	2824016	2825392	-	two component system histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	3
BC2864	2825385	2826032	-	two-component response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
BC3042	3000755	3001750	-	two-component sensor kinase ybdK	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
BC3043	3001747	3002418	-	two-component response regulator ybdJ	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
BC3100	3057774	3060179	-	sporulation kinase	HK	Classic	Histidine kinase, Classic contains 3 PAS_4,1 HisKA,1 HATPase_c	5
BC3113	3078578	3079522	-	two-component response regulator ycbB	RR	YcbB	Response regulator, YcbB family contains 1 Response_reg,1 YcbB	0
BC3114	3079527	3080834	-	two-component sensor kinase ycbA	HK	Classic	Histidine kinase, Classic contains 1 HisKA_MA, 1 HATPase_c	5
BC3200	3175320	3175994	+	two-component response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
BC3201	3175991	3177364	+	two component system histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	1
BC3207	3183822	3185609	+	two-component protein kinase	HK	Hybrid	Histidine kinase, Hybrid contains 1 HisKA_3,1 HATPase_c,1 Response_reg,1 HTH_LUXR	5
BC3227	3208653	3210029	-	two component system histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
BC3228	3210031	3210708	-	two-component response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
BC3528	3493763	3495016	+	sporulation kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	7
BC3601	3578889	3579566	-	two-component response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
BC3641	3609764	3611296	+	sensor protein atoS	HK	Classic	Histidine kinase, Classic contains 1 PAS,1 PAS_4,1 HisKA,1 HATPase_c	0
BC4007	3981594	3982868	-	sporulation kinase B	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	7
BC4170	4132476	4133270	-	stage 0 sporulation protein A	RR	Spo0A	Response regulator, Spo0A family contains 1 Response_reg,1 Spo0A_C	0
BC4432	4374240	4375322	-	two-component sensor kinase yvcQ	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	2
BC4433	4375312	4376019	-	two-component response regulator yvcP	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
BC4538	4482183	4483118	-	two-component sensor kinase ycbM	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	1
BC4539	4483120	4483812	-	two-component response regulator ycbL	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
BC4588	4534219	4535982	-	phosphate regulon sensor protein phoR	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 PAS,1 HisKA,1 HATPase_c	2
BC4589	4535975	4536694	-	alkaline phosphatase synthesis transcriptional                     regulatory protein PhoP	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
BC4665	4606496	4607185	-	two-component response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
BC4666	4607187	4608641	-	two component system histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
BC4770	4703068	4704288	-	sporulation kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA_MA, 1 HATPase_c	5
BC4771	4704285	4705538	-	sporulation kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	7
BC4809	4733728	4735581	-	two component system histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	1
BC4810	4735578	4736267	-	two-component response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
BC4835	4755207	4755902	+	two-component response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
BC4836	4755905	4756927	+	two component system histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	2
BC4848	4771537	4772643	-	sensor protein vanS	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
BC4849	4772636	4773334	-	two-component response regulator vanR	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
BC5028	4929510	4930175	+	two-component response regulator VanRB	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
BC5029	4930153	4931595	+	sensor protein VanSB	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	1
BC5107	5009094	5009771	-	two-component response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
BC5261	5168838	5170268	-	two component system histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
BC5262	5170280	5170954	-	two-component response regulator	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
BC5336	5243592	5243960	-	sporulation initiation phosphotransferase F	RR	CheY	Response regulator, CheY family contains 1 Response_reg	0
BC5352	5263189	5263680	-	two-component response regulator YocG	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
BC5353	5263756	5264886	-	two-component sensor kinase YocF	HK	Classic	Histidine kinase, Classic contains 1 HisKA_3,1 HATPase_c	6
BC5411	5325887	5326534	-	two-component response regulator yhcZ	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
BC5412	5326555	5328126	-	two-component sensor protein yhcY	HK	Classic	Histidine kinase, Classic contains 1 GAF,1 HisKA_3,1 HATPase_c	0
BC5417	5332769	5333485	-	two-component response regulator	RR	LytTR	Response regulator, LytTR family contains 1 Response_reg,1 LytTR	0
BC5440	5362479	5363219	-	autolysin response regulator	RR	LytTR	Response regulator, LytTR family contains 1 Response_reg,1 LytTR	0
BC5441	5363197	5364966	-	autolysin sensor kinase	HK	Classic	Histidine kinase, Classic contains 1 GAF,1 His_kinase,1 HATPase_c	6
BC5455	5381208	5382254	-	sporulation kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	0
BC5462	5388227	5390068	-	two-component sensor kinase yycG	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
BC5463	5390072	5390779	-	two-component response regulator yycF	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
