#Arthrobacter sp. Rue61a (49 genes)
Gene	Start	Stop	Strand	Original description	class	type	P2CS description	tm
ARUE_c04350	442903	443529	-	transcriptional regulatory protein LiaR	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
ARUE_c04360	443526	444755	-	signal transduction histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA_3,1 HATPase_c	5
ARUE_c05170	532640	533323	-	transcriptional regulatoryprotein YxjL	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
ARUE_c05180	533372	534610	-	signal transduction histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA_3,1 HATPase_c	5
ARUE_c06690	700441	702018	+	sensor protein CitS	HK	Classic	Histidine kinase, Classic contains 1 Diacid_rec, 1 PAS, 1 HisKA_MA, 1 HATPase_c, 	1
ARUE_c06700	702015	702683	+	transcriptional regulatory protein CitT	RR	IclR	Response regulator, IclR family contains 1 Response_reg,1 HTH_IclR	0
ARUE_c06910	723668	725083	-	signal transduction histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
ARUE_c06920	725080	725748	-	sensory transduction protein RegX	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
ARUE_c07530	790160	791656	-	signal transduction histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	3
ARUE_c07540	791678	792418	-	response regulator MprA	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
ARUE_c08470	894984	896210	+	signal-transduction histidine kinase SenX	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	0
ARUE_c08480	896225	896887	+	sensory transduction protein RegX	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
ARUE_c09550	1017042	1018451	-	sensor histidine kinase YycG	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
ARUE_c09560	1018509	1019228	-	response regulator MprA	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
ARUE_c10270	1100555	1102225	-	alkaline phosphatase synthesis sensor protein                     PhoR	HK	Classic	Histidine kinase, Classic contains 1 PAS_4,1 HisKA,1 HATPase_c	6
ARUE_c10280	1102325	1103068	+	alkaline phosphatase synthesis transcriptional                     regulatory protein PhoP	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
ARUE_c13590	1480776	1481435	-	Two-component system response regulator	RR	unclassified	Response regulator, unclassified contains 1 Response_reg,1 TrmB	0
ARUE_c13600	1481428	1483128	-	sensor protein CitS	HK	Classic	Histidine kinase, Classic contains 1 PAS, 1 HisKA_MA, 1 HATPase_c, 	1
ARUE_c14260	1556347	1557066	-	response regulatory protein	RR	LytTR	Response regulator, LytTR family contains 1 Response_reg,1 LytTR	0
ARUE_c14270	1557088	1558290	-	inner membrane protein YehU	HK	Classic	Histidine kinase, Classic contains 1 His_kinase,1 HATPase_c	1
ARUE_c14870	1620430	1621197	+	transcriptional regulatory protein YycF	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
ARUE_c14880	1621184	1622437	+	signal transduction histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	3
ARUE_c15760	1719956	1720669	-	C4-dicarboxylate response regulator DctR	RR	unclassified	Response regulator, unclassified contains 1 Response_reg,1 FaeA	0
ARUE_c15770	1720666	1722312	-	sensor protein CitS	HK	Classic	Histidine kinase, Classic contains 1 PAS, 1 HisKA_MA, 1 HATPase_c, 	2
ARUE_c17480	1908380	1908985	-	transcriptional regulatory protein PdtaR	RR	AmiR_NasR	Response regulator, AmiR_NasR family contains 1 Response_reg,1 ANTAR	0
ARUE_c19490	2134633	2135331	+	transcriptional regulatory protein devR (dosR)	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
ARUE_c19500	2135336	2137051	-	redox sensor histidine kinase response regulator                     DevS	HK	Classic	Histidine kinase, Classic contains 1 GAF,1 HisKA_3,1 HATPase_c	0
ARUE_c26540	2922158	2923285	+	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA_3,1 HATPase_c	5
ARUE_c26550	2923289	2924002	+	response regulator responding to cell wall                     stress/antimicrobial peptides	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
ARUE_c28380	3127232	3128701	-	sensor histidine kinase PdtaS	HK	Classic	Histidine kinase, Classic contains 1 PAS_4,1 HisKA_2,1 HATPase_c	1
ARUE_c28500	3146016	3147899	-	sensor histidine kinase MtrB	HK	Classic	Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c	2
ARUE_c28510	3147976	3148650	-	DNA-binding response regulator MtrA	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
ARUE_c30000	3301997	3302293	+	hypothetical protein	PP	HPt	Phosphotransfer protein contains 1 Hpt	0
ARUE_c31190	3430302	3430934	-	Two-component system response regulator	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
ARUE_c31200	3430976	3432547	-	signal transduction histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 PspC,1 HisKA_3,1 HATPase_c	5
ARUE_c31720	3479572	3480246	-	KDP operon transcriptional regulatory protein                     KdpE	RR	OmpR	Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C	0
ARUE_c31730	3480243	3481778	-	sensor protein KdpD	HK	Classic	Histidine kinase, Classic contains 1 HisKA,1 HATPase_c	3
ARUE_c33710	3705418	3708879	+	hybrid signal transduction histidine kinase J	HK	Unorthodox	Histidine kinase, Unorthodox contains 1 PAS,1 HisKA,1 HATPase_c,2 Response_reg,1 Hpt	10
ARUE_c33720	3708876	3709784	+	response regulator PleD	RR	PleD	Response regulator, PleD family contains 1 Response_reg,1 GGDEF	0
ARUE_c33760	3713627	3715270	+	sensor histidine kinase ResE	HK	Classic	Histidine kinase, Classic contains 1 GAF,1 HisKA,1 HATPase_c	0
ARUE_c36390	4007212	4008333	+	transcriptional regulatory protein CseB	RR	RsbU	Response regulator, RsbU family contains 1 Response_reg,1 SpoIIE	0
ARUE_c39550	4337921	4338574	-	transcriptional regulatoryprotein YxjL	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
ARUE_c39560	4338594	4339784	-	two-component system, sensor kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA_3,1 HATPase_c	3
ARUE_c40880	4476687	4477916	+	histidine protein kinase DivJ	HK	Classic	Histidine kinase, Classic contains 1 GAF,1 HisKA,1 HATPase_c	0
ARUE_c41230	4513911	4514327	-	hypothetical protein	PP	HPt	Phosphotransfer protein contains 1 Hpt	0
ARUE_c43020	4689528	4690220	-	response regulator containing a CheY-like signal                     receiver domain and LuxR-C-like HTH DNA-binding domain	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
ARUE_c43030	4690217	4691506	-	sensor histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA_3,1 HATPase_c	4
ARUE_c43130	4707272	4707904	-	response regulator containing a CheY-like signal                     receiver domain and LuxR-C-like HTH DNA-binding domain	RR	NarL	Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR	0
ARUE_c43140	4707925	4709205	-	signal transduction histidine kinase	HK	Classic	Histidine kinase, Classic contains 1 HisKA_3,1 HATPase_c	4
