#Alteromonas macleodii str. Aegean Sea MED64 (109 genes) Gene Start Stop Strand Original description class type P2CS description tm I533_00895 195616 196896 - response regulator/GGDEF domain-containing protein RR PleD Response regulator, PleD family contains 1 Response_reg,1 GGDEF 0 I533_01260 281340 282047 - two-component response regulator RR OmpR Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C 0 I533_01265 282202 283884 - Signal transduction histidine kinase HK Classic Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c 1 I533_01325 296587 297993 - sensory histidine kinase in two-component region HK Classic Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c 3 I533_01330 297977 298660 - two component response regulator transcriptional regulator RR OmpR Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C 0 I533_01625 354226 354870 + transcriptional regulator RR OmpR Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C 0 I533_01785 382566 383612 + chemotaxis-specific protein-glutamate methyltransferase RR CheB Response regulator, CheB family contains 1 Response_reg,1 CheB_methylest 0 I533_01840 395818 399660 + putative two-component system sensor kinase/response regulator fusion protein HK Hybrid Histidine kinase, Hybrid contains 1 HisKA,1 HATPase_c,1 Response_reg,1 HTH_AraC 1 I533_02135 471679 474807 - sensor protein BarA HK Unorthodox Histidine kinase, Unorthodox contains 1 HisKA,1 HATPase_c,1 Response_reg,1 Hpt 7 I533_02345 522437 523180 + transcriptional regulatory protein CpxR RR OmpR Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C 0 I533_02350 523180 524541 + sensor histidine kinase protein HK Classic Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c 2 I533_02540 562418 565243 + putative signal transduction histidine kinase two-component system HK Hybrid Histidine kinase, Hybrid contains 1 Cache_1,1 HisKA,1 HATPase_c,1 Response_reg 7 I533_02910 636312 636479 + two-component sensor PP HisKa Phosphotransfer protein contains 1 HisKA 0 I533_02960 646476 647546 + response regulator RR unclassified Response regulator, unclassified contains 1 Response_reg 0 I533_03415 753617 755302 - Signal transduction histidine kinase HK Classic Histidine kinase, Classic contains 1 HisKA_MA, 1 HATPase_c 0 I533_03420 755610 756299 + DNA-binding response regulator PhoB RR OmpR Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C 0 I533_03425 756399 757700 + phosphate regulon sensor protein PhoR HK Classic Histidine kinase, Classic contains 1 PAS,1 HisKA,1 HATPase_c 1 I533_03475 770044 771120 - two-component system response regulator (hybrid family) protein RR RpfG Response regulator, RpfG family contains 1 Response_reg,1 HD 0 I533_03480 771104 773992 - PAS signal transduction protein HK Hybrid Histidine kinase, Hybrid contains 2 PAS,1 HisKA,1 HATPase_c,1 Response_reg 1 I533_03660 813108 814397 - sensor histidine kinase HK Classic Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c 3 I533_03665 814399 815064 - response regulator RR OmpR Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C 0 I533_03875 855098 857977 - multi-sensor hybrid histidine kinase HK Hybrid Histidine kinase, Hybrid contains 1 PAS_4,1 PAS,1 HisKA,1 HATPase_c,1 Response_reg 3 I533_04210 933799 934794 + response regulator RR unclassified Response regulator, unclassified contains 1 Response_reg 0 I533_04775 1054297 1055226 + chemotaxis protein RR CheV Response regulator, CheV family contains 1 CheW,1 Response_reg 0 I533_04880 1075127 1077223 + hypothetical protein PP HPt Phosphotransfer protein contains 1 Hpt 0 I533_04945 1088938 1090080 + sensory box sensor histidine kinase in two-component regulatory system HK Classic Histidine kinase, Classic contains 1 PAS_4,1 HisKA,1 HATPase_c 0 I533_04950 1090097 1091434 + flagellar regulatory protein C RR NtrC Response regulator, NtrC family contains 1 Response_reg,1 AAA_5,1 HTH_8 0 I533_05050 1111280 1111663 + chemotaxis protein CheY RR CheY Response regulator, CheY family contains 1 Response_reg 0 I533_05060 1112466 1114721 + chemotaxis protein cheA HK CheA Histidine kinase, CheA contains 1 Hpt,1 H-kinase_dim,1 HATPase_c,1 CheW 4 I533_05065 1114750 1115880 + chemotaxis-specific protein-glutamate methyltransferase RR CheB Response regulator, CheB family contains 1 Response_reg,1 CheB_methylest 0 I533_05985 1314489 1315049 - histidine kinase PP HPt Phosphotransfer protein contains 1 Hpt 0 I533_06470 1435448 1436248 - chemotaxis protein CheY/response regulator receiver domain-containing protein RR FrzZ Response regulator, FrzZ family contains 2 Response_reg 0 I533_06485 1437104 1438810 + response regulator HK Hybrid Histidine kinase, Hybrid contains 1 Response_reg, 1 SpoIIE, 1 HisKA_MA, 1 HATPase_c, 0 I533_06505 1442291 1443700 + two-component system sensor kinase HK Classic Histidine kinase, Classic contains 1 HisKA,1 HATPase_c 2 I533_06515 1444284 1445624 + two-component system response regulator RR NtrC Response regulator, NtrC family contains 1 Response_reg,1 AAA,1 HTH_8 0 I533_06830 1509466 1511088 - response regulator receiver protein RR unclassified Response regulator, unclassified contains 1 Response_reg 0 I533_06875 1522037 1523368 - sensor histidine kinase HK Classic Histidine kinase, Classic contains 1 HisKA,1 HATPase_c 2 I533_06880 1523365 1524039 - response regulator in two-component regulatory system with PhoQ RR OmpR Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C 0 I533_07030 1556003 1556671 + LuxR family response regulator RR NarL Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR 0 I533_07035 1556712 1560077 - Na+/proline symporter PutP-like domain/sensory histidine kinase and receiver domain-containing protein HK Hybrid Histidine kinase, Hybrid contains 1 HisKA,1 HATPase_c,1 Response_reg 12 I533_07280 1615426 1616991 + response regulator RR RpfG Response regulator, RpfG family contains 1 Response_reg,1 HD 0 I533_07575 1685949 1686311 - sensor/response hybrid PP HPt Phosphotransfer protein contains 1 Hpt 0 I533_07580 1686500 1686796 + response regulator RR CheY Response regulator, CheY family contains 1 Response_reg 0 I533_07590 1687423 1688184 + putative response regulator RR PleD Response regulator, PleD family contains 1 Response_reg,1 GGDEF 0 I533_07595 1688346 1690349 + Signal transduction histidine kinase HK Hybrid Histidine kinase, Hybrid contains 1 HisKA,1 HATPase_c,1 Response_reg 0 I533_07955 1775421 1776869 - sensor histidine kinase HK Classic Histidine kinase, Classic contains 1 HisKA,1 HATPase_c 0 I533_08100 1808745 1812455 + putative sensor protein HK Unorthodox Histidine kinase, Unorthodox contains 1 Cache_1,1 PAS,1 HisKA,1 HATPase_c,1 Response_reg,1 Hpt 3 I533_08485 1904377 1907649 + putative two-component member protein HK Unorthodox Histidine kinase, Unorthodox contains 3 MHYT,1 PAS,1 PAS_3,1 HisKA,1 HATPase_c,1 Response_reg,1 Hpt 8 I533_08490 1907652 1908665 + response regulator CheB (receptor modification enzyme, protein-glutamate methylesterase) RR RpfG Response regulator, RpfG family contains 1 Response_reg,1 HD 0 I533_09605 2158107 2159708 - CheY-like receiver protein RR unclassified Response regulator, unclassified contains 1 Response_reg 0 I533_09675 2172489 2173562 + sensor histidine kinase HK Classic Histidine kinase, Classic contains 1 His_kinase,1 HATPase_c 5 I533_09680 2173564 2174391 + response regulator in two-component regulatory system RR LytTR Response regulator, LytTR family contains 1 Response_reg,1 LytTR 0 I533_09775 2191086 2192726 - response regulator with TPR repeat RR unclassified Response regulator, unclassified contains 1 Response_reg 0 I533_09820 2199934 2200638 - Signal transduction histidine kinase HK Classic Histidine kinase, Classic contains 1 HisKA_MA, 1 HATPase_c 0 I533_10205 2293207 2293851 - two component LuxR family transcriptional regulator RR NarL Response regulator, NarL family contains 1 Response_reg,1 GerE 0 I533_10580 2376071 2376706 - regulator in two-component regulatory system RR NarL Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR 0 I533_11345 2546198 2547529 + sigma-54 interacting response regulator protein RR NtrC Response regulator, NtrC family contains 1 Response_reg,1 AAA_5,1 HTH_8 0 I533_11350 2547549 2547773 + hypothetical protein PP HisKa Phosphotransfer protein contains 1 HisKA 0 I533_11355 2547778 2549280 + two-component sensor histidine kinase HK Classic Histidine kinase, Classic contains 1 CHASE3,1 HisKA,1 HATPase_c 2 I533_11360 2549277 2549729 + two-component response regulator RR CheY Response regulator, CheY family contains 1 Response_reg 0 I533_11365 2549742 2551850 + two-component sensor histidine kinase and response regulator hybrid HK Hybrid Histidine kinase, Hybrid contains 3 Response_reg,1 HisKA,1 HATPase_c 0 I533_11720 2633630 2635159 + response regulator RR RpfG Response regulator, RpfG family contains 1 REC,1 HD 0 I533_11725 2635156 2636508 + sensor histidine kinase HK Classic Histidine kinase, Classic contains 1 GAF, 1 HisKA_MA, 1 HATPase_c, 0 I533_12030 2705240 2709295 - diguanylate cyclase HK Hybrid Histidine kinase, Hybrid contains 1 HisKA,1 HATPase_c,2 Response_reg 2 I533_12375 2783603 2786164 - bacteriophytochrome protein HK Classic Probable incomplete histidine kinase contains 1 PAS_2,1 GAF,1 PHY,1 HWE_HK,1 Response_reg 0 I533_13160 2966225 2967184 - chemotaxis protein CheV RR CheV Response regulator, CheV family contains 1 CheW,1 Response_reg 0 I533_13625 3077285 3077995 + transcriptional regulatory protein CpxR RR OmpR Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C 0 I533_13630 3078009 3079385 + sensor histidine kinase HK Classic Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c 2 I533_13795 3115224 3118391 + sensory box histidine kinase/response regulator HK Hybrid Histidine kinase, Hybrid contains 1 HisKA,1 HATPase_c,2 Response_reg 0 I533_13805 3119027 3121681 - histidine kinase A HK Hybrid Histidine kinase, Hybrid contains 1 PAS_2,1 GAF,1 PHY,1 HisKA,1 HATPase_c,1 Response_reg 0 I533_13890 3138049 3141414 + two-component hybrid sensor and regulator HK Hybrid Histidine kinase, Hybrid contains 1 HisKA,1 HATPase_c,1 Response_reg 17 I533_13895 3141407 3142303 + two-component response regulator RR NarL Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR 0 I533_14040 3187304 3188932 + histidine kinase response regulator hybrid protein HK Hybrid Histidine kinase, Hybrid contains 1 GAF,1 HisKA,1 HATPase_c,1 Response_reg 0 I533_14340 3256598 3257893 - sigma-54 dependent DNA-binding response regulator, Fis family protein RR unclassified Response regulator, unclassified contains 1 Response_reg,1 AAA_5 0 I533_14345 3257976 3260003 - sensor histidine kinase HK Classic Histidine kinase, Classic contains 1 HisKA_MA, 1 HATPase_c 10 I533_14585 3307291 3307689 - response regulator with Chemotaxis-specific methylesterase domain RR CheY Response regulator, CheY family contains 1 Response_reg 0 I533_14595 3309822 3310502 + response regulator consisting of a CheY-like receiver domain-containing protein and a winged-helix DNA-binding domain-containing protein RR OmpR Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C 0 I533_14600 3310499 3311905 + Signal transduction histidine kinase HK Classic Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c 2 I533_14710 3330576 3331814 + sensor histidine kinase PP HisKa Phosphotransfer protein contains 1 HisKA_3 0 I533_14715 3331811 3332428 + DNA-binding response regulator, LuxR family protein RR NarL Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR 0 I533_14760 3343632 3344882 + response regulator containing a CheY-like receiver domain and a GGDEF domain RR PleD Response regulator, PleD family contains 2 Response_reg,1 GGDEF 0 I533_14780 3348881 3351235 - aerobic respiration control sensor protein ArcB HK Unorthodox Histidine kinase, Unorthodox contains 1 PAS_4,1 HisKA,1 HATPase_c,1 Response_reg,1 Hpt 3 I533_14975 3393472 3393849 - rteB, two-component system response regulator RR CheY Response regulator, CheY family contains 1 Response_reg 0 I533_15000 3398829 3399914 + nitrogen regulation protein NR(II) HK Classic Histidine kinase, Classic contains 1 PAS,1 HisKA,1 HATPase_c 0 I533_15005 3399904 3401313 + two-component system response regulator RR NtrC Response regulator, NtrC family contains 1 Response_reg,1 AAA_5,1 HTH_8 0 I533_15010 3401404 3402543 - HD-GYP domain-containing protein PP HPt Phosphotransfer protein contains 1 Hpt,1 HD 0 I533_15055 3408590 3411265 + response regulator receiver ATP-binding protein HK Hybrid Histidine kinase, Hybrid contains 1 HAMP,1 HisKA,1 HATPase_c,1 Response_reg 3 I533_15530 3519341 3520000 + two component LuxR family transcriptional regulator RR NarL Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR 0 I533_15535 3520058 3522571 - PAS/PAC sensor-containing hybrid histidine kinase HK Hybrid Histidine kinase, Hybrid contains 1 PAS_4,1 HisKA,1 HATPase_c,1 Response_reg 0 I533_15555 3527507 3528190 - two component LuxR family transcriptional regulator RR NarL Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR 0 I533_15560 3528187 3529446 - sensor histidine kinase HK Classic Histidine kinase, Classic contains 1 HisKA_3,1 HATPase_c 2 I533_15625 3545009 3545665 + response regulator (activator) in two-component regulatory system wtih UhpB RR NarL Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR 0 I533_15730 3575068 3575433 + response regulator RR CheY Response regulator, CheY family contains 1 Response_reg 0 I533_15740 3576014 3577324 + sensor histidine kinase HK Classic Histidine kinase, Classic contains 1 HisKA_MA, 1 HATPase_c 0 I533_15805 3598111 3600336 - response regulator/GGDEF/EAL domain-containing protein RR PleD_VieA Response regulator, PleD_VieA family contains 1 Response_reg,1 GGDEF,1 EAL 0 I533_16335 3710252 3711241 + response regulator RR PleD Response regulator, PleD family contains 1 Response_reg,1 GGDEF 0 I533_16390 3724018 3724662 - regulator in two-component regulatory system RR NarL Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR 0 I533_16850 3847398 3849506 - GAF sensor hybrid histidine kinase HK Hybrid Histidine kinase, Hybrid contains 1 GAF,1 PAS_4,1 HisKA,1 HATPase_c,1 Response_reg 0 I533_16960 3872539 3875265 - multi-sensor signal transduction histidine kinase HK Hybrid Histidine kinase, Hybrid contains 1 PAS_2,1 GAF,1 PHY,1 HisKA,1 HATPase_c,1 Response_reg 0 I533_17025 3887346 3887906 + response regulator RR unclassified Response regulator, unclassified contains 1 Response_reg 0 I533_17035 3888764 3890434 + Signal transduction histidine kinase HK Classic Histidine kinase, Classic contains 1 HAMP, 1 HisKA_MA, 1 HATPase_c, 1 I533_17040 3890512 3891816 + response regulator RR unclassified Response regulator, unclassified contains 1 Response_reg 0 I533_17330 3954802 3955491 + two component transcriptional regulator, winged helix family protein RR OmpR Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C 0 I533_17335 3955604 3957772 + sensor histidine kinase HK Classic Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c 3 I533_17790 4058014 4059240 - histidine kinase A HK Classic Histidine kinase, Classic contains 1 GAF,1 HisKA,1 HATPase_c 0 I533_17815 4063823 4065328 - sensor histidine kinase HK Classic Histidine kinase, Classic contains 1 HisKA_MA, 1 HATPase_c 0 I533_18055 4120792 4122717 - Signal transduction histidine kinase HK Hybrid Histidine kinase, Hybrid contains 1 HAMP,1 HisKA,1 HATPase_c,1 Response_reg 2 I533_18525 4222468 4223190 + osmolarity response regulator RR OmpR Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C 0 I533_18535 4223289 4224623 + osmolarity sensor protein HK Classic Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c 2