#Acidithiobacillus ferrivorans SS3 (36 genes) Gene Start Stop Strand Original description class type P2CS description tm Acife_0019 21702 23915 + integral membrane sensor signal transduction histidine kinase HK Classic Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c 4 Acife_0020 23937 25337 + two component sigma-54 specific Fis family transcriptional regulator RR NtrC Response regulator, NtrC family contains 1 Response_reg,1 AAA_5,1 HTH_8 0 Acife_0053 63440 64186 + two component winged helix family transcriptional regulator RR OmpR Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C 0 Acife_0054 64186 65463 + integral membrane sensor signal transduction histidine kinase HK Classic Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c 2 Acife_0217 227174 227920 + two component winged helix family transcriptional regulator RR OmpR Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C 0 Acife_0218 227917 229179 + integral membrane sensor signal transduction histidine kinase HK Classic Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c 3 Acife_0256 272716 273801 + nitrogen specific signal transduction histidine kinase NtrB HK Classic Histidine kinase, Classic contains 1 PAS_4,1 HisKA,1 HATPase_c 1 Acife_0257 273798 275240 + Fis family nitrogen metabolism transcriptional regulator NtrC RR NtrC Response regulator, NtrC family contains 1 Response_reg,1 AAA_5,1 HTH_8 0 Acife_0682 700287 701717 - two component sigma-54 specific Fis family transcriptional regulator RR NtrC Response regulator, NtrC family contains 1 Response_reg,1 AAA_5,1 HTH_8 0 Acife_0684 702165 703649 - integral membrane sensor signal transduction histidine kinase HK Classic Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c 2 Acife_0839 859427 861115 - putative transcriptional regulator HK Classic Histidine kinase, Classic contains 1 HisKA_MA, 1 HATPase_c 0 Acife_1059 1079789 1080472 + two component winged helix family transcriptional regulator RR OmpR Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C 0 Acife_1060 1080469 1081764 + integral membrane sensor signal transduction histidine kinase HK Classic Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c 3 Acife_1080 1099630 1102371 + osmosensitive K+ channel signal transduction histidine kinase HK Classic Histidine kinase, Classic contains 1 HisKA,1 HATPase_c 4 Acife_1081 1102375 1103118 + two component winged helix family transcriptional regulator RR OmpR Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C 0 Acife_1286 1287316 1288026 + two component transcriptional regulator PhoB, winged helix family RR OmpR Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C 0 Acife_1287 1288007 1289437 + multi-sensor signal transduction histidine kinase HK Classic Histidine kinase, Classic contains 1 HisKA,1 HATPase_c 3 Acife_1337 1347292 1349235 - response regulator receiver modulated diguanylate cyclase/phosphodiesterase RR PleD_VieA Response regulator, PleD_VieA family contains 1 Response_reg,1 GGDEF,1 EAL 0 Acife_1338 1349238 1351334 - PAS/PAC sensor hybrid histidine kinase HK Hybrid Histidine kinase, Hybrid contains 2 PAS,1 HisKA,1 HATPase_c,1 Response_reg 0 Acife_1591 1587302 1589878 - multi-sensor hybrid histidine kinase HK Unorthodox Histidine kinase, Unorthodox contains 1 HisKA,1 HATPase_c,1 Response_reg,1 Hpt 5 Acife_1592 1589920 1591089 - response regulator receiver modulated metal dependent phosphohydrolase RR RpfG Response regulator, RpfG family contains 1 Response_reg,1 HD 0 Acife_1651 1646548 1646934 + response regulator RR unclassified Response regulator, unclassified contains 1 REC 0 Acife_1857 1843104 1844357 + integral membrane sensor signal transduction histidine kinase HK Classic Histidine kinase, Classic contains 1 HisKA,1 HATPase_c 7 Acife_1858 1844357 1844932 + two component Fis family transcriptional regulator RR PrrA Response regulator, PrrA family contains 1 Response_reg,1 HTH_8 0 Acife_2082 2061505 2062071 + response regulator receiver and ANTAR domain-containing protein RR AmiR_NasR Response regulator, AmiR_NasR family contains 1 Response_reg,1 ANTAR 0 Acife_2130 2099387 2100700 - integral membrane sensor signal transduction histidine kinase HK Classic Histidine kinase, Classic contains 1 HisKA,1 HATPase_c 2 Acife_2131 2100697 2101359 - two component winged helix family transcriptional regulator RR OmpR Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C 0 Acife_2136 2106331 2107005 + two component heavy metal response winged helix family transcriptional regulator RR OmpR Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C 0 Acife_2137 2106983 2108425 + heavy metal sensor signal transduction histidine kinase HK Classic Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c 2 Acife_2487 2482398 2483972 + nitrogen specific signal transduction histidine kinase NtrB HK Classic Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c 2 Acife_2488 2484003 2485373 + two component sigma-54 specific Fis family transcriptional regulator RR NtrC Response regulator, NtrC family contains 1 Response_reg,1 AAA_5,1 HTH_8 0 Acife_2691 2676408 2676845 - 50S ribosomal protein L15 RR CheY Response regulator, CheY family contains 1 Response_reg 0 Acife_2859 2825255 2826613 - two component sigma-54 specific Fis family transcriptional regulator RR NtrC Response regulator, NtrC family contains 1 Response_reg,1 AAA_5,1 HTH_8 0 Acife_2860 2826610 2828208 - multi-sensor signal transduction histidine kinase HK Classic Histidine kinase, Classic contains 1 HisKA,1 HATPase_c 6 Acife_2890 2852833 2854212 - putative two component, sigma54 specific, transcriptional regulator RR NtrC Response regulator, NtrC family contains 1 Response_reg,1 AAA_5,1 HTH_8 0 Acife_2892 2854519 2856159 - integral membrane sensor signal transduction histidine kinase HK Classic Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c 3