#Achromobacter xylosoxidans NH44784-1996 (116 genes) Gene Start Stop Strand Original description class type P2CS description tm NH44784_001191 107203 108228 - sensor kinase protein HK Classic Histidine kinase, Classic contains 1 HisKA,1 HATPase_c 1 NH44784_001201 108405 109076 - response regulator protein RR OmpR Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C 0 NH44784_002301 219498 220187 + two-component response regulatory protein RR OmpR Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C 0 NH44784_002311 220165 221679 + Sensor protein basS/pmrB HK Classic Histidine kinase, Classic contains 1 2CSK_N,1 HAMP,1 HisKA,1 HATPase_c 3 NH44784_003081 296477 297136 + Two-component system response regulator QseB RR OmpR Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C 0 NH44784_003091 297133 298476 + Sensory histidine kinase QseC HK Classic Histidine kinase, Classic contains 1 2CSK_N,1 HAMP,1 HisKA,1 HATPase_c 2 NH44784_005871 607780 608514 + Two-component system response regulator OmpR RR OmpR Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C 0 NH44784_005881 608549 609943 + Osmolarity sensory histidine kinase EnvZ HK Classic Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c 2 NH44784_006531 689316 690446 - Osmosensitive K+ channel histidine kinase KdpD HK Classic Histidine kinase, Classic contains 1 HisKA,1 HATPase_c 0 NH44784_006541 690484 692067 - Two-component hybrid sensor and regulator HK Hybrid Histidine kinase, Hybrid contains 1 PAS,1 HisKA,1 HATPase_c,1 Response_reg 0 NH44784_006561 693380 693781 + Chemotaxis protein methyltransferase CheR RR CheY Response regulator, CheY family contains 1 Response_reg 0 NH44784_006621 702285 702983 + two-component system regulatory protein RR OmpR Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C 0 NH44784_006631 702988 704394 + Two-component system sensor protein HK Classic Histidine kinase, Classic contains 1 2CSK_N,1 HAMP,1 HisKA,1 HATPase_c 2 NH44784_008001 856465 859251 + Osmosensitive K+ channel histidine kinase KdpD HK Classic Histidine kinase, Classic contains 1 HisKA,1 HATPase_c 4 NH44784_008011 859261 859953 + DNA-binding response regulator KdpE RR OmpR Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C 0 NH44784_009211 982689 983381 + DNA-binding heavy metal response regulator RR OmpR Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C 0 NH44784_009221 983635 984789 + Heavy metal sensor histidine kinase HK Classic Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c 1 NH44784_011431 1198134 1199684 - putative two-component sensor HK Classic Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c 1 NH44784_011441 1199684 1200394 - Two-component system response regulator OmpR RR OmpR Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C 0 NH44784_013771 1467311 1468822 - two component sensor kinase HK Classic Histidine kinase, Classic contains 1 2CSK_N,1 HAMP,1 HisKA,1 HATPase_c 2 NH44784_013781 1468851 1469537 - Tricarboxylate transport transcriptional regulator TctD RR OmpR Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C 0 NH44784_015541 1642795 1643466 + Tricarboxylate transport transcriptional regulator TctD RR OmpR Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C 0 NH44784_015551 1643453 1645939 + putative periplasmic iron-binding protein HK Classic Histidine kinase, Classic contains 1 2CSK_N,1 HAMP,1 HisKA,1 HATPase_c,1 SBP_bac_1 3 NH44784_016881 1794645 1795343 + Phosphate regulon transcriptional regulatory protein PhoB (SphR RR OmpR Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C 0 NH44784_016891 1795356 1796663 + Phosphate regulon sensor protein PhoR (SphS HK Classic Histidine kinase, Classic contains 1 HisKA,1 HATPase_c 1 NH44784_016901 1796728 1797414 + DNA-binding heavy metal response regulator RR OmpR Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C 0 NH44784_016911 1797411 1798811 + two-component sensor kinase HK Classic Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c 2 NH44784_019121 2026781 2028121 - Heavy metal sensor histidine kinase HK Classic Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c 3 NH44784_019131 2028121 2028810 - DNA-binding heavy metal response regulator RR OmpR Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C 0 NH44784_022241 2376458 2377135 + Tricarboxylate transport transcriptional regulator TctD RR OmpR Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C 0 NH44784_022251 2377125 2378609 + Tricarboxylate transport sensor protein TctE HK Classic Histidine kinase, Classic contains 1 2CSK_N,1 HAMP,1 HisKA,1 HATPase_c 3 NH44784_022661 2424659 2426983 - probable two-component sensor protein HK Classic Histidine kinase, Classic contains 1 CHASE2,1 PAS_4,1 HisKA,1 HATPase_c 5 NH44784_022681 2428132 2428848 - probable two-component response regulator RR OmpR Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C 0 NH44784_022691 2429222 2429809 + Two-component response regulator RR OmpR Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C 0 NH44784_025691 2735377 2737698 + Nitrogen regulation protein ntrY HK Classic Histidine kinase, Classic contains 1 HAMP,1 PAS_4,1 HisKA,1 HATPase_c 4 NH44784_025701 2737710 2738399 + putative two-component response regulator RR unclassified Response regulator, unclassified contains 1 Response_reg 0 NH44784_025921 2760987 2761556 + putative transcriptional regulator RR OmpR Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C 0 NH44784_027411 2919107 2919745 - response regulator, NarL-family RR NarL Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR 0 NH44784_027421 2919880 2921232 + two-component hybrid sensor and regulator HK Classic Histidine kinase, Classic contains 1 HisKA,1 HATPase_c 6 NH44784_028521 3035733 3037034 + Sensory histidine kinase in two-component regulatory system with RstA HK Classic Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c 2 NH44784_029041 3092005 3092820 - two-component response regulator RR OmpR Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C 0 NH44784_029621 3166104 3166817 + putative two-component system response regulator RR OmpR Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C 0 NH44784_029631 3166814 3168142 + two-component system sensor protein HK Classic Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c 2 NH44784_030841 3311047 3312183 - two-component hybrid sensor and regulator HK Hybrid Histidine kinase, Hybrid contains 1 Response_reg,1 HisKA,1 HATPase_c 0 NH44784_030871 3313673 3317077 - Signal transduction histidine kinase HK Hybrid Histidine kinase, Hybrid contains 1 CHASE3,1 HisKA,1 HATPase_c,3 Response_reg 1 NH44784_030881 3317261 3317680 + two component, sigma54 specific, transcriptional regulator, Fis family RR CheY Response regulator, CheY family contains 1 Response_reg 0 NH44784_031301 3357844 3361209 + Chemotaxis protein methyltransferase CheR HK Hybrid Histidine kinase, Hybrid contains 2 HisKA,2 HATPase_c,2 Response_reg 1 NH44784_031931 3432201 3432920 - two component transcriptional regulator, LuxR family RR NarL Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR 0 NH44784_032871 3522239 3522793 - Dna binding response regulator PrrA (RegA RR PrrA Response regulator, PrrA family contains 1 Response_reg,1 HTH_8 0 NH44784_032881 3522795 3523997 - Sensor histidine kinase PrrB (RegB HK Classic Histidine kinase, Classic contains 1 HisKA,1 HATPase_c 6 NH44784_033251 3557537 3559333 - Probable two-component sensor, near polyamine transporter HK Classic Histidine kinase, Classic contains 1 HisKA_MA, 1 HATPase_c 7 NH44784_033261 3559408 3560130 - two component transcriptional regulator, LuxR family RR NarL Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR 0 NH44784_033551 3591356 3592018 + Two-component system response regulator QseB RR OmpR Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C 0 NH44784_033561 3592015 3593397 + Sensor protein PhoQ HK Classic Histidine kinase, Classic contains 1 HAMP, 1 HisKA_MA, 1 HATPase_c, 1 NH44784_035531 3783130 3783495 - PAS/PAC sensor hybrid histidine kinase RR CheY Response regulator, CheY family contains 1 Response_reg 0 NH44784_035541 3783492 3785699 - Phytochrome, two-component sensor histidine kinase HK Classic Histidine kinase, Classic contains 1 PAS_2,1 GAF,1 PHY,1 HisKA,1 HATPase_c 0 NH44784_036821 3929673 3931058 - C4-dicarboxylate transport transcriptional regulatory protein RR NtrC Response regulator, NtrC family contains 1 Response_reg,1 AAA_5,1 HTH_8 0 NH44784_036831 3931160 3933112 - Signal transduction histidine kinase regulating C4-dicarboxylate transport system HK Classic Histidine kinase, Classic contains 1 HisKA,1 HATPase_c 1 NH44784_038321 4092367 4093014 + probable two-component response regulator RR OmpR Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C 0 NH44784_038331 4092996 4094522 - GGDEF and EAL domain proteins HK Classic Histidine kinase, Classic contains 1 HisKA,1 HATPase_c 8 NH44784_038881 4158256 4158990 - probable two-component response regulator RR NarL Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR 0 NH44784_042351 4521857 4522483 - Nitrogen regulation protein NR(I RR NarL Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR 0 NH44784_042361 4522480 4524234 - tw-component sensor kinase HK Classic Histidine kinase, Classic contains 1 PAS_4,1 HisKA,1 HATPase_c 2 NH44784_042521 4542570 4542905 + Chemotaxis regulator-transmits chemoreceptor signals to flagelllar motor components CheY RR CheY Response regulator, CheY family contains 1 Response_reg 0 NH44784_042531 4542947 4545076 + Signal transduction histidine kinase CheA HK CheA Histidine kinase, CheA contains 1 Hpt,1 H-kinase_dim,1 HATPase_c,1 CheW 0 NH44784_042571 4548387 4549403 + Chemotaxis response regulator protein-glutamate methylesterase CheB RR CheB Response regulator, CheB family contains 1 Response_reg,1 CheB_methylest 0 NH44784_042581 4549454 4549843 + Chemotaxis regulator-transmits chemoreceptor signals to flagelllar motor components CheY RR CheY Response regulator, CheY family contains 1 Response_reg 0 NH44784_044001 4687435 4688151 - two-component response regulator RR OmpR Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C 0 NH44784_045421 4832375 4833439 + Nitrogen regulation protein NR(II HK Classic Histidine kinase, Classic contains 1 PAS,1 HisKA,1 HATPase_c 0 NH44784_045431 4833439 4834941 + Nitrogen regulation protein NR(I RR NtrC Response regulator, NtrC family contains 1 Response_reg,1 AAA_5,1 HTH_8 0 NH44784_045741 4870722 4871423 + Transcriptional regulatory protein RstA RR OmpR Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C 0 NH44784_045751 4871416 4872708 + Sensory histidine kinase in two-component regulatory system with RstA HK Classic Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c 1 NH44784_046121 4909947 4910678 - DNA-binding response regulator RR OmpR Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C 0 NH44784_046171 4915033 4916202 + putative diguanylate phosphodiesterase RR VieA Response regulator, VieA family contains 1 Response_reg,1 EAL 0 NH44784_046251 4922240 4925254 + two-component sensor histidine kinase HK Hybrid Histidine kinase, Hybrid contains 1 GAF,1 PAS_4,1 PAS_3,1 HisKA,1 HATPase_c,1 Response_reg 1 NH44784_046291 4928631 4930001 + Putative transcriptional regulatory protein RR NtrC Response regulator, NtrC family contains 1 Response_reg,1 AAA_5,1 HTH_8 0 NH44784_046591 4957845 4959158 - Sensory histidine kinase in two-component regulatory system with RstA HK Classic Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c 1 NH44784_047701 5067985 5068638 - DNA-binding response regulator, LuxR family RR NarL Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR 0 NH44784_047711 5068635 5069723 - Signal transduction histidine kinase HK Classic Histidine kinase, Classic contains 1 PAS,1 HisKA_3,1 HATPase_c 0 NH44784_048231 5127035 5128405 - two-component system sensor protein HK Classic Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c 2 NH44784_048241 5128398 5129108 - two-component system regulatory protein RR OmpR Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C 0 NH44784_048631 5173391 5174818 + histidine kinase HK Classic Histidine kinase, Classic contains 1 HisKA,1 HATPase_c 1 NH44784_048641 5174815 5175429 + two component transcriptional regulator, LuxR family RR NarL Response regulator, NarL family contains 1 Response_reg,1 GerE 0 NH44784_049171 5229999 5230670 - Nitrate/nitrite response regulator protein RR NarL Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR 0 NH44784_049181 5230684 5232621 - Nitrate/nitrite sensor protein HK Classic Histidine kinase, Classic contains 1 HAMP,1 GAF,1 HisKA_3,1 HATPase_c 2 NH44784_049551 5276276 5277007 - Two-component response regulator RR OmpR Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C 0 NH44784_049741 5295131 5296549 + Sensor histidine kinase HK Classic Histidine kinase, Classic contains 1 Cache_2,1 HisKA_3,1 HATPase_c 2 NH44784_049751 5296546 5297202 + two component transcriptional regulator, LuxR family RR NarL Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR 0 NH44784_052001 5561009 5562052 - diguanylate cyclase (GGDEF domain) with PAS/PAC sensor RR PleD Response regulator, PleD family contains 1 Response_reg,1 GGDEF 0 NH44784_052011 5562089 5563081 - Chemotaxis response regulator protein-glutamate methylesterase CheB RR CheB Response regulator, CheB family contains 1 Response_reg,1 CheB_methylest 0 NH44784_052021 5563102 5565363 - Sensor histidine kinase/response regulator HK CheA Histidine kinase, CheA contains 1 Hpt,1 HATPase_c,1 CheW,1 Response_reg 0 NH44784_052491 5615644 5616984 - Sensory histidine kinase in two-component regulatory system with RstA HK Classic Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c 1 NH44784_053641 5739755 5742439 - putative hybrid sensor and regulator protein( EC:2.7.3.- HK Hybrid Histidine kinase, Hybrid contains 1 HisKA,1 HATPase_c,1 Response_reg 7 NH44784_053651 5742432 5743253 - two-component hybrid sensor and regulator RR YesN Response regulator, YesN family contains 1 Response_reg,1 HTH_AraC 0 NH44784_053781 5769547 5770905 - putative two component sensor kinase HK Classic Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c 2 NH44784_053791 5770902 5771570 - Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain RR OmpR Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C 0 NH44784_054441 5847883 5848578 + Copper-sensing two-component system response regulator CpxR RR OmpR Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C 0 NH44784_054451 5848578 5849972 + Copper sensory histidine kinase CpxA HK Classic Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c 2 NH44784_058271 6251270 6252412 + Sensory box histidine kinase/response regulator HK Classic Histidine kinase, Classic contains 1 PAS,1 HisKA_3,1 HATPase_c 1 NH44784_058281 6252425 6253063 + two component transcriptional regulator, LuxR family RR NarL Response regulator, NarL family contains 1 Response_reg,1 HTH_LUXR 0 NH44784_058961 6336961 6338292 - Response regulator of zinc sigma-54-dependent two-component system RR NtrC Response regulator, NtrC family contains 1 Response_reg,1 AAA_5,1 HTH_8 0 NH44784_058971 6338277 6339599 - Sensor protein of zinc sigma-54-dependent two-component system HK Classic Histidine kinase, Classic contains 1 HisKA,1 HATPase_c 3 NH44784_059881 6440018 6441313 - Response regulator of zinc sigma-54-dependent two-component system RR NtrC Response regulator, NtrC family contains 1 Response_reg,1 AAA_5,1 HTH_8 0 NH44784_059891 6441310 6442695 - PAS/PAC sensor signal transduction histidine kinase HK Classic Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c 2 NH44784_060601 6518518 6519819 - Flp pilus assembly protein, ATPase CpaE RR unclassified Response regulator, unclassified contains 1 Response_reg 0 NH44784_061491 6619811 6623044 - Signal transduction histidine kinase HK Unorthodox Histidine kinase, Unorthodox contains 1 HisKA,1 HATPase_c,1 Response_reg,1 Hpt 4 NH44784_061501 6623138 6624412 - Probable response regulator RR VieA Response regulator, VieA family contains 1 Response_reg,1 EAL 0 NH44784_061511 6624409 6627171 - periplasmic sensor hybrid histidine kinase HK Hybrid Histidine kinase, Hybrid contains 1 HisKA,1 HATPase_c,1 Response_reg 3 NH44784_062461 6710731 6712014 - Sensory histidine kinase QseC HK Classic Histidine kinase, Classic contains 1 HisKA,1 HATPase_c 2 NH44784_062471 6712011 6712676 - Two-component system response regulator QseB RR OmpR Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C 0 NH44784_062541 6719068 6720258 + two component response regulator RR VieA Response regulator, VieA family contains 1 Response_reg,1 EAL 0 NH44784_062551 6720324 6723533 + kinase sensor protein HK Unorthodox Histidine kinase, Unorthodox contains 1 HisKA,1 HATPase_c,1 Response_reg,1 Hpt 2 NH44784_062561 6723598 6724242 + DNA-binding response regulator, LuxR family RR NarL Response regulator, NarL family contains 1 Response_reg,1 GerE 0 NH44784_062731 6743532 6744239 + transcriptional regulator, winged helix family RR OmpR Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C 0 NH44784_062981 6770013 6770750 + Transcriptional regulatory protein ompR RR OmpR Response regulator, OmpR family contains 1 Response_reg,1 Trans_reg_C 0 NH44784_062991 6770751 6772076 + sensor histidine kinase HK Classic Histidine kinase, Classic contains 1 HAMP,1 HisKA,1 HATPase_c 2